HHsearch alignment for GI: 254781024 and conserved domain: TIGR03149

>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.
Probab=95.54  E-value=0.011  Score=37.63  Aligned_cols=51  Identities=20%  Similarity=0.501  Sum_probs=41.4

Q ss_pred             CCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             781321358600688965997056651566670475730068888625367988
Q gi|254781024|r  493 SGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEWNPPQGG  546 (554)
Q Consensus       493 ~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~p~gg  546 (554)
T Consensus        99 ~p~C~~vCP~~A~--~k~~~~GiV~vd~~~CiGC~~C~~aCPy~a~~~~-~~~~  149 (225)
T TIGR03149        99 NAPCVAVCPTGAS--FKDEETGIVDVHKDLCVGCQYCIAACPYRVRFIH-PVTK  149 (225)
T ss_pred             CCHHHHHCCCCCE--EECCCCCEEEEEHHHCCCHHHHHHCCCCCCCEEC-CCCC
T ss_conf             9455755885841--7768885799756869404189861999983548-8889