HHsearch alignment for GI: 254781024 and conserved domain: TIGR03149
>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.
Probab=95.54 E-value=0.011 Score=37.63 Aligned_cols=51 Identities=20% Similarity=0.501 Sum_probs=41.4
Q ss_pred CCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 781321358600688965997056651566670475730068888625367988
Q gi|254781024|r 493 SGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEWNPPQGG 546 (554)
Q Consensus 493 ~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~p~gg 546 (554)
T Consensus 99 ~p~C~~vCP~~A~--~k~~~~GiV~vd~~~CiGC~~C~~aCPy~a~~~~-~~~~ 149 (225)
T TIGR03149 99 NAPCVAVCPTGAS--FKDEETGIVDVHKDLCVGCQYCIAACPYRVRFIH-PVTK 149 (225)
T ss_pred CCHHHHHCCCCCE--EECCCCCEEEEEHHHCCCHHHHHHCCCCCCCEEC-CCCC
T ss_conf 9455755885841--7768885799756869404189861999983548-8889