HHsearch alignment for GI: 254781024 and conserved domain: pfam00070
>pfam00070 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=97.59 E-value=0.001 Score=44.76 Aligned_cols=77 Identities=25% Similarity=0.377 Sum_probs=56.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEECCC
Q ss_conf 79998976899999999980899739999786778986402740333678886787264148854322436699997799
Q gi|254781024|r 17 VVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFLNAQ 96 (554)
Q Consensus 17 VvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l~~~ 96 (554)
T Consensus 2 v~iiGgG~ig~E~A~~l~~~G--~~Vtiie~~~~~------------------l~~~----------------------- 38 (82)
T pfam00070 2 VVVVGGGYIGLEFASALAKLG--SKVTVVERRDRL------------------LRGF----------------------- 38 (82)
T ss_pred EEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCC------------------CHHC-----------------------
T ss_conf 999998899999999998639--278998125733------------------0227-----------------------
Q ss_pred CCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEE
Q ss_conf 767736543565446788268888898999999998749533068224347762776201454
Q gi|254781024|r 97 RSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGIL 159 (554)
Q Consensus 97 ~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~ 159 (554)
T Consensus 39 ----------------------d-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~ 78 (82)
T pfam00070 39 ----------------------D-EEIAKILQEKLEKNGIEVLLNTTVEEIEGNGDGVLVVLE 78 (82)
T ss_pred ----------------------C-HHHHHHHHHHHHHCCCEEECCCEEEEEEEECCEEEEEEE
T ss_conf ----------------------9-889999999998669999749999999996999999998