HHsearch alignment for GI: 254781024 and conserved domain: pfam01494

>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=99.97  E-value=1.2e-27  Score=210.93  Aligned_cols=330  Identities=18%  Similarity=0.153  Sum_probs=186.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHH--CCCHHHH--CCCCCCCEEEEEE
Q ss_conf             64779998976899999999980899739999786778986402740333678886--7872641--4885432243669
Q gi|254781024|r   14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSL--LPRWRED--KGHPFHTVVKRDL   89 (554)
Q Consensus        14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL--~Pd~~e~--~g~pl~~~v~~d~   89 (554)
T Consensus         1 ~~DV~IvGaG~aGl~lA~~L~~~G--i~v~V~Er~~~~~~~-g~g~~l~p~~~~~L~~lGl~~~~~~~~~~~----~~~~   73 (349)
T pfam01494         1 ETDVLIVGGGPAGLMLALLLARAG--VRVVLVERHATTSVL-PRAGGLNQRTMELLRQAGLEDRILAEGAPH----EGMG   73 (349)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCC--CCEEEECCCCCCCCC-CEEEEECHHHHHHHHHCCCHHHHHHCCCCC----CEEE
T ss_conf             997899992889999999998779--989999289998878-779998989999999879868998506875----1059


Q ss_pred             EEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf             99977997677365435654467882688888989999999987495330682243477627762014541243244346
Q gi|254781024|r   90 YWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDG  169 (554)
Q Consensus        90 ~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~  169 (554)
T Consensus        74 ~~~~~~~~-~~~~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~i~~~~~v~~~~~~~~~v~~~~~~~~~~-----  144 (349)
T pfam01494        74 LAFYNTSR-RRADLD---FLTSPPRVTVYPQTELEPILREHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRRDG-----  144 (349)
T ss_pred             EEECCCCC-CEEECC---CCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEEECCCC-----
T ss_conf             99837864-222014---556776268862999999999999857998996617877520599437999845899-----


Q ss_pred             CCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCEEEEEECCCCCCCCC
Q ss_conf             65787563026774257860664432554211224899888898998898888751-65667888089950434768766
Q gi|254781024|r  170 TQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKI-KPQYHRRGLALHSIGWPLDMNTS  248 (554)
Q Consensus       170 ~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei-~~~~~~~G~~~h~~g~~~~~~~~  248 (554)
T Consensus       145 -------~~~~i~adlvIgADG~~S~vR~~l~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (349)
T pfam01494       145 -------EEYTVRAKYLVGCDGGRSPVRKQLGIEFEGFEG---VPFG-SLDVLFDAPDLSDPVERAFVHYLIY---APHS  210 (349)
T ss_pred             -------CEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCC---CEEE-EEEEEECCCCCCCCCCCCCEEEEEE---CCCC
T ss_conf             -------558999768841577764899975999755545---4389-9999952578421235674289997---1899


Q ss_pred             CCEEEEECCCCE-EEEEEEECCCC----CCCCCCHHHHHHHHHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCC
Q ss_conf             412576647980-59999832666----5668898899999860800456503882630351340054212487423088
Q gi|254781024|r  249 GGGFVYHFDDNL-VSIGFVLHLDY----RNPWISAYEELQRFKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLSFPG  323 (554)
Q Consensus       249 gggwiy~~~d~~-~~iG~v~~ld~----~~~~~~~~~~lq~fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~~~g  323 (554)
T Consensus       211 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~-~~~~~~~gr  285 (349)
T pfam01494       211 RGFMVGPWRSAGRSRYYVQVPWDPEVEERPEEFTDEEAKQRLRSAVG--IDLADVEIL--WKSIWGVRSR-VATRYRKGR  285 (349)
T ss_pred             CEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCEE--EEEECCCCCE-ECCCCCCCC
T ss_conf             86999972799827999997078542225443899999999998648--654555635--5786200356-735511598


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             7996123233136643522689999999999999987458865303678998642
Q gi|254781024|r  324 GSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKHDDPIEIEDSWRQ  378 (554)
Q Consensus       324 ~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~~~l~~Ye~~~~~  378 (554)
T Consensus       286 v~LiGDAAH~~~P~~GqG~n~aieDA~~La~~L~~~~~g~~~~~~L~~Ye~~R~~  340 (349)
T pfam01494       286 VFLAGDAAHIHPPTGGQGLNTGIQDAFNLAWKLAAVLRGTAGEALLDTYEAERRP  340 (349)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             9999861023886354677589999999999999997499988999999999999