HHsearch alignment for GI: 254781024 and conserved domain: pfam07992
>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=99.07 E-value=2.5e-09 Score=83.72 Aligned_cols=106 Identities=29% Similarity=0.371 Sum_probs=69.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEECC
Q ss_conf 77999897689999999998089973999978677898640274033367888678726414885432243669999779
Q gi|254781024|r 16 DVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFLNA 95 (554)
Q Consensus 16 DVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l~~ 95 (554)
T Consensus 1 DVvIIGgG~AGl~aA~~l~~~g--~~v~lid~~~~~~--------~~~~----~i~~~~--------------------- 45 (277)
T pfam07992 1 DVVIIGGGPAGLAAAIYLARLG--LKVALIEKEGGTC--------YNRG----CIPKKL--------------------- 45 (277)
T ss_pred CEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCE--------EEEC----CCCCCC---------------------
T ss_conf 9999997699999999998499--9799993799935--------7557----747711---------------------
Q ss_pred CCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 97677365435654467882688888989999999987495330682243477627762014541243244346657875
Q gi|254781024|r 96 QRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHY 175 (554)
Q Consensus 96 ~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~ 175 (554)
T Consensus 46 ----------~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~i~~--~~~~v--~~~-------------- 89 (277)
T pfam07992 46 ----------L--------LEAAEVGKLDLRPLEQYKDEGIEVLLGTGVTAIDK--AGKKV--TLD-------------- 89 (277)
T ss_pred ----------C--------CCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEC--CCCEE--EEC--------------
T ss_conf ----------6--------45433145618999999875979996877999978--99989--987--------------
Q ss_pred CCEEEEEEEEEEEECCCC
Q ss_conf 630267742578606644
Q gi|254781024|r 176 IAPMLLLSKYMLVGEGAC 193 (554)
Q Consensus 176 ~~g~~i~Ak~vI~AdG~~ 193 (554)
T Consensus 90 -~g~~~~~d~lviAtG~~ 106 (277)
T pfam07992 90 -DGKELTYDKLVIATGAR 106 (277)
T ss_pred -CCCEEECCEEEECCCCC
T ss_conf -89399859999987998