HHsearch alignment for GI: 254781025 and conserved domain: cd07557
>cd07557 trimeric_dUTPase Trimeric dUTP diphosphatases. Trimeric dUTP diphosphatases, or dUTPases, are the most common family of dUTPase, found in bacteria, eukaryotes, and archaea. They catalyze the hydrolysis of the dUTP-Mg complex (dUTP-Mg) into dUMP and pyrophosphate. This reaction is crucial for the preservation of chromosomal integrity as it removes dUTP and therefore reduces the cellular dUTP/dTTP ratio, and prevents dUTP from being incorporated into DNA. It also provides dUMP as the precursor for dTTP synthesis via the thymidylate synthase pathway. dUTPases are homotrimeric, except some monomeric viral dUTPases, which have been shown to mimic a trimer. Active sites are located at the subunit interface.
Probab=99.94 E-value=2e-26 Score=170.41 Aligned_cols=92 Identities=46% Similarity=0.684 Sum_probs=84.5
Q ss_pred CEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEEECCCC
Q ss_conf 40878910377873893799739996586022587614678752663133222023550366568788769999980794
Q gi|254781025|r 28 SGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDYRGEIKILLINLGQE 107 (154)
Q Consensus 28 AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~YrGei~v~l~N~~~~ 107 (154)
T Consensus 1 ag~Dl~~~~~-~~~~~i~p~~~~li~t~~~i~~p~~~~~~i~~RSsl~-~~Gl~v~~-~g~iD~gy~G~i~~~l~N~~~~ 77 (92)
T cd07557 1 AGYDLRLGED-FEGIVLPPGETVLVPTGEAIELPEGYVGLVFPRSSLA-RKGITVHN-AGVIDPGYRGEITLELYNLGPE 77 (92)
T ss_pred CCEEEEECCC-CCCEEECCCCEEEEEEEEEEECCCCCEEEEEECCHHE-ECCEEEEC-CCEECCCCCCEEEEEEEECCCC
T ss_conf 9564675446-8858999998999980399998999489999346330-72669734-4148689876799999999899
Q ss_pred EEEEECCCCEEEEEE
Q ss_conf 499955950358999
Q gi|254781025|r 108 NFLIMRGMRIAQLII 122 (154)
Q Consensus 108 ~~~i~~G~RIaQlv~ 122 (154)
T Consensus 78 ~~~i~~G~riaQlvf 92 (92)
T cd07557 78 PVVIKKGDRIAQLVF 92 (92)
T ss_pred CEEECCCCEEEEEEC
T ss_conf 889879997999979