HHsearch alignment for GI: 254781025 and conserved domain: pfam05784

>pfam05784 Herpes_UL82_83 Betaherpesvirus UL82/83 protein N terminus. This family represents the N terminal region of the Betaherpesvirus UL82 and UL83 proteins. As viruses are reliant upon their host cell to serve as proper environments for their replication, many have evolved mechanisms to alter intracellular conditions to suit their own needs. Human cytomegalovirus induces quiescent cells to enter the cell cycle and then arrests them in late G(1), before they enter the S phase, a cell cycle compartment that is presumably favourable for viral replication. The protein product of the human cytomegalovirus UL82 gene, pp71, can accelerate the movement of cells through the G(1) phase of the cell cycle. This activity would help infected cells reach the late G(1) arrest point sooner and thus may stimulate the infectious cycle. pp71 also induces DNA synthesis in quiescent cells, but a pp71 mutant protein that is unable to induce quiescent cells to enter the cell cycle still retains the abilit
Probab=95.37  E-value=0.21  Score=28.08  Aligned_cols=93  Identities=16%  Similarity=0.125  Sum_probs=61.6

Q ss_pred             CCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEE
Q ss_conf             74357886408789103778738937997399965860225876146787526631332220235503665687887699
Q gi|254781025|r   20 PEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDYRGEIKI   99 (154)
Q Consensus        20 P~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~YrGei~v   99 (154)
T Consensus       249 P~L~~~~~NGftV~~----Pr~~~l~~g~~~~v~i~~~feS~~~~~~lF~P~~ip----Glsi--~~~~w~--~~~~L~i  316 (346)
T pfam05784       249 PFLRPHPRNGFTVLC----PKNLHLKPGQTSHVMIDNAFESDQTHAGLFFPKDIP----GLSI--SCGPWM--ERQPLFI  316 (346)
T ss_pred             CCCCCCCCCCEEEEC----CCCEECCCCCEEEEEEEEEEECCCCEEEEEECCCCC----CCEE--EECCCC--CCCEEEE
T ss_conf             732117999789978----875660899869999974895188169999265579----9776--732158--9974899


Q ss_pred             EEEECCCCEEEEECCCCEEEEEEEEC
Q ss_conf             99980794499955950358999750
Q gi|254781025|r  100 LLINLGQENFLIMRGMRIAQLIIANS  125 (154)
Q Consensus       100 ~l~N~~~~~~~i~~G~RIaQlv~~~~  125 (154)
T Consensus       317 ~i~a~~~-~v~i~~~q~LG~lhFf~r  341 (346)
T pfam05784       317 ELRATKE-SVRIEHMQPLGELHFFPR  341 (346)
T ss_pred             EEEECCC-CEECCCCCEEEEEEEEEC
T ss_conf             9984355-410237875348998515