HHsearch results for GI: 254781025 and protein with PDBid: 1dun_A
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A
Probab=100.00 E-value=7.7e-44 Score=268.22 Aligned_cols=129 Identities=29% Similarity=0.466 Sum_probs=120.2
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCCCCC
Q ss_conf 70374357886408789103778738937997399965860225876146787526631332220235503665687887
Q gi|254781025|r 17 IPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDYRGE 96 (154)
Q Consensus 17 ~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~YrGe 96 (154)
..+|+++++.||||||+++ ++++|+|++.++|+||+++++|+|++++|++|||++ |+||.+. .|+||+|||||
T Consensus 6 ~~~~~~~~~~daGyDl~~~----~d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~-k~gl~v~--~gvID~gy~G~ 78 (134)
T 1dun_A 6 GTQIKEKRDEDAGFDLCVP----YDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMA-KQGLLIN--GGIIDEGYTGE 78 (134)
T ss_dssp CSSBCCCCTTCSSEEEECS----SCEEECTTCEEEEECCCEEECCTTEEEEEECCHHHH-HTTEEEE--CCEEETTCCSC
T ss_pred CCCCCCCCCCCEEEEEECC----CCEEECCCCEEEEECCCEEECCCCEEEEEECCCHHC-CCCCCCC--CEEECCCCCCE
T ss_conf 7757878868660499539----898999999899988739976862799998666320-2783124--33876888646
Q ss_pred EEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 6999998079449995595035899975043406998713577542688887354679
Q gi|254781025|r 97 IKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154)
Q Consensus 97 i~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154)
+++.++|++++++.|++|+|||||+|.++.++++++++ +++.|+||++||||||||
T Consensus 79 l~v~l~N~~~~~~~i~~G~rIaQlv~~~~~~~~~~~~~--~~~~t~RG~~gFGSTGv~ 134 (134)
T 1dun_A 79 IQVICTNIGKSNIKLIEGQKFAQLIILQHHSNSRQPWD--ENKISQRGDKGFGSTGVF 134 (134)
T ss_dssp CEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCC--TTCC--------------
T ss_pred EEEEEEECCCCCEEECCCCEEEEEEEEECCCCEEEEEC--CCCCCCCCCCCCCCCCCC
T ss_conf 99999989998779848996999999786866699915--588161679979747799