HHsearch results for GI: 254781025 and protein with PDBid: 3lqw_A
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica}
Probab=100.00 E-value=0 Score=298.17 Aligned_cols=139 Identities=35% Similarity=0.556 Sum_probs=129.3
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf 78999767547970374357886408789103778738937997399965860225876146787526631332220235
Q gi|254781025|r 5 DIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLN 84 (154)
Q Consensus 5 ~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n 84 (154)
.++|+++. ++|.||+|+|++||||||||. ++++|+|+++++|+||+++++|+||+++|+||||+++|+||.+
T Consensus 25 ~~~vkkl~--~~a~lP~r~t~~~AG~DL~a~----ed~vI~P~~~~lI~TGi~i~iP~g~~~~i~~RSs~~~k~gl~~-- 96 (163)
T 3lqw_A 25 VLLVKKLV--EDAIVPTRGSKCAAGIDLYSN----TNFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDV-- 96 (163)
T ss_dssp CCEEEESS--TTCCCCEECSTTCSEEEEECS----SCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEE--
T ss_pred EEEEEECC--CCCCCCCCCCCCCEEEEEECC----CCEEECCCCEEEEECCCEEECCCCCEEEEEECCCCCCCCCEEE--
T ss_conf 28899979--995177678998387899559----9989999988999788478659897899971267330143451--
Q ss_pred CCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 503665687887699999807944999559503589997504340699871357754268888735467
Q gi|254781025|r 85 SPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154)
Q Consensus 85 ~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154)
++||||+||||||+|.|+|.+++++.|++|+||||+||.++..++|++++ ++++|+||++||||||-
T Consensus 97 ~~GvID~gYrGel~v~l~N~~~~~~~I~~G~RIaQlv~~~~~~~~~~ev~--~l~~t~RG~gGFGSTGk 163 (163)
T 3lqw_A 97 GAGVIDEDYRGEIKVILFNHSNEIFNGRKGDRIAQLIIERISYCRISEVK--ELNTTDRGTNGFGSTGK 163 (163)
T ss_dssp CCCEECTTCCSEEEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCS--CCCCC------------
T ss_pred ECCEECCCCCEEEEEEEEECCCCCEECCCCCEEEEEEEEECCCEEEEEEC--CCCCCCCCCCCCCCCCC
T ss_conf 15439468971999999989998650458999999986031733799918--78877467998877989