HHSEARCH alignment of GI: 254781025 and SCOP domain: d1pkha_

Alignment

Probab=99.73  E-value=7.6e-19  Score=124.72  Aligned_cols=85  Identities=21%  Similarity=0.363  Sum_probs=77.8

Q ss_pred             EEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEE
Q ss_conf             89379973999658602258761467875266313322202355036656878876999998079449995595035899
Q gi|254781025|r   42 VELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLI  121 (154)
Q Consensus        42 ~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv  121 (154)
                      ..+.|++.+|+.|...+.+|+++.+.+.+|||++ +.|+.+.+++|+||+||+|.+.+.++|.+ .++.|.+|+||||++
T Consensus        88 ~~l~p~~~~L~~t~E~v~lp~~~~~~~~~kSS~a-R~G~~~~~ta~~iDpGy~G~ltlei~n~~-~pi~I~~g~ri~Ql~  165 (182)
T d1pkha_          88 VDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLG-RVFLTSHQTAGWIDAGFKGKITLEIVAFD-KPVILYKNQRIGQLI  165 (182)
T ss_dssp             CSEEEESCEEEEEEEEEECCTTEEEEEEECHHHH-TTTEESCSSCCEECTTCEEEEEEEEEESS-SCEEEETTCEEEEEE
T ss_pred             EEECCCCEEEEEEEEEEEECCCCEEEEECCCCEE-EEEECCCCCCEEECCCCCCEEEEEEEECC-CCEEECCCCEEEEEE
T ss_conf             0771798799999769995472158997344024-43100212332889998766999999789-898980899899999


Q ss_pred             EEECCCC
Q ss_conf             9750434
Q gi|254781025|r  122 IANSVRA  128 (154)
Q Consensus       122 ~~~~~~~  128 (154)
                      |.+...+
T Consensus       166 F~~~~~~  172 (182)
T d1pkha_         166 FSKLLSP  172 (182)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
T ss_conf             9987776

SCOP domain information

class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Bifunctional dCTP deaminase/dUTPase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]