HHsearch alignment for GI: 254781026 and conserved domain: PRK05201

>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=98.62  E-value=4.4e-08  Score=68.19  Aligned_cols=86  Identities=17%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             HHHHC-CCCEEEEECHHHCC------------HHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCC
Q ss_conf             99827-99889980387859------------889999999997195230100307898470156752274658878898
Q gi|254781026|r   76 EDSLA-HNGVLFLDEIPEFS------------PQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKD  142 (186)
Q Consensus        76 ~i~lA-h~GVLflDE~~e~~------------~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~  142 (186)
T Consensus       242 Ai~~aEq~GIVFIDEIDKIa~~~~~~g~DVS~EGVQrdLLpivEGt~V~-tK~G~V~TdhILFIasGAFh~s--------  312 (442)
T PRK05201        242 AIERVEQNGIVFIDEIDKIAKRGEGSGPDVSREGVQRDLLPLVEGSTVS-TKYGMVKTDHILFIASGAFHVA--------  312 (442)
T ss_pred             HHHHHHHCCCEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-CCCCCCCCCEEEEECCCCCCCC--------
T ss_conf             9998876170451146565303578898977330788878875388555-6777602550345504500147--------


Q ss_pred             CCCCCCCHHHHHHHHHHCCHHHHHCCCEEEECCCCCHHHHH
Q ss_conf             87643899999999851224321004259983885668885
Q gi|254781026|r  143 ENVCIRGPRCATEYQARISGPLMDRIDIRIAVPSRTHIRSF  183 (186)
Q Consensus       143 ~~~c~c~~~~~~~Y~~rls~plldR~Dl~v~~~~~~~~~~~  183 (186)
T Consensus       313 -K-----PSD-------LIPEl~GRlPv~v~L~~L~~~dl~  340 (442)
T PRK05201        313 -K-----PSD-------LIPELQGRFPIRVELDALTEEDFV  340 (442)
T ss_pred             -C-----CCH-------HHHHHCCCCEEEEECCCCCHHHHH
T ss_conf             -8-----202-------249871755058882449999999