HHsearch alignment for GI: 254781026 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=100.00 E-value=0 Score=510.52 Aligned_cols=185 Identities=49% Similarity=0.828 Sum_probs=177.9
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 218 l~GPPGsGKTmla~r~~giLP~L~~~EalE~~~v~S~~~~l~~~~~~~rQRPFR~PHHsAS~~~lvGGG~~P~PGEiSLA 297 (505)
T TIGR00368 218 LLGPPGSGKTMLASRLQGILPPLTNEEALETARVLSLVGKLIDRKQWKRQRPFRSPHHSASKPALVGGGSIPKPGEISLA 297 (505)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHH
T ss_conf 67824962689998751057864512666678888888757652301106867786500256664058752228512020
Q ss_pred CCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEE-ECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9988998038785988999999999719523010030789-847015675227465887889887643899999999851
Q gi|254781026|r 81 HNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKIS-YPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQAR 159 (186)
Q Consensus 81 h~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~-~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~r 159 (186)
T Consensus 298 hnGvLFLDEl~EF~r~vL~~LR~PlEdg~i~iSRa~~ki~kyPA~FqL~aAmNpcPcG~~~~~~~~c~cSp~q~~~Yl~k 377 (505)
T TIGR00368 298 HNGVLFLDELPEFKRKVLDALREPLEDGSISISRAKAKIFKYPARFQLVAAMNPCPCGHYGGKITHCRCSPQQISRYLNK 377 (505)
T ss_pred CCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 05410432220446789987178742670688632201000872455675617887767778744465897899999874
Q ss_pred CCHHHHHCCCEEEECCCCCHHHHHHC
Q ss_conf 22432100425998388566888528
Q gi|254781026|r 160 ISGPLMDRIDIRIAVPSRTHIRSFCN 185 (186)
Q Consensus 160 ls~plldR~Dl~v~~~~~~~~~~~~~ 185 (186)
T Consensus 378 Lsgp~LDRiDl~v~v~~~~n~~~L~~ 403 (505)
T TIGR00368 378 LSGPFLDRIDLSVEVPLLPNPGLLSE 403 (505)
T ss_pred CCCHHHCHHCCEECCCCCCCCCHHHH
T ss_conf 27112000114001378887413442