>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..

Probab=97.86 E-value=1.1e-05 Score=54.04 Aligned_cols=110 Identities=23% Similarity=0.386 Sum_probs=72.0 Q ss_pred CCCCCCCHHHHHHHHHHHHCCCC-CHHHHHHHHCEEECC-CCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCC----CCH Q ss_conf 97778605999999988748898-978853230000002-788875653111202037752100110234345----682 Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPL-SLEESLEVSMIYSIS-GHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQ----VLP 74 (186) Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l-~~~e~le~~~i~s~~-g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~----~~p 74 (186) T Consensus 234 ~VGEPGVGKTAI~EGLA~~I~~~~kvPe~Lkn~~IY~LDmG~------LLAGTKY-------------RGDFE~RLK~V~ 294 (774) T TIGR02639 234 LVGEPGVGKTAIVEGLAQRIAEGQKVPEVLKNAKIYSLDMGT------LLAGTKY-------------RGDFEERLKAVV 294 (774) T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECHHH------HHHHCCC-------------CCHHHHHHHHHH T ss_conf 044888644899999999864156467002478345404345------6410245-------------424789999999 Q ss_pred HHHHHCCCC-EEEEECHHHC---------CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCC Q ss_conf 799827998-8998038785---------988999999999719523010030789847015675227465887889887 Q gi|254781026|r 75 GEDSLAHNG-VLFLDEIPEF---------SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDEN 144 (186) Q Consensus 75 G~i~lAh~G-VLflDE~~e~---------~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~ 144 (186) T Consensus 295 ~Ei~~~~~anILFIDEIHTIVGAGATSGGsmDASNLLKPaL~~G~i---------------RCIGsTTy~EY~~~FeKDr 359 (774) T TIGR02639 295 SEIEKEPNANILFIDEIHTIVGAGATSGGSMDASNLLKPALASGKI---------------RCIGSTTYEEYKNHFEKDR 359 (774) T ss_pred HHHHCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCE---------------EEECCCCHHHHHCHHHCCC T ss_conf 9985289995466411010331787875155244321125307877---------------8622652486411101020

HHsearch alignment for GI: 254781026 and conserved domain: TIGR02639