HHsearch alignment for GI: 254781026 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.88 E-value=0.014 Score=35.98 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=21.4
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 977786059999999887488989
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLS 24 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~ 24 (186)
T Consensus 32 IvG~sGsGKSTLl~~l~g~~~~~~ 55 (218)
T cd03290 32 IVGQVGCGKSSLLLAILGEMQTLE 55 (218)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 999999809999999855565677