HHsearch alignment for GI: 254781027 and conserved domain: PRK10787
>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=97.64 E-value=9.4e-05 Score=44.60 Aligned_cols=65 Identities=20% Similarity=0.239 Sum_probs=53.0
Q ss_pred HCCEEEEEEECCCCC-HHH------HHHHHHCC-CEEEEEHHHHHHHHH----HCCCCEEEECCCHHHHHHHHCCCC
Q ss_conf 356689985035775-379------99872039-869983655045563----128810751074999999970986
Q gi|254781027|r 12 FSHYLAVGEINLDGS-LPA------AICAKNMN-KDFICPQSCGSEAAW----ASDSLRIVAPSTLLELINHLNNKQ 76 (108)
Q Consensus 12 l~~~~~iGELsLdG~-Lp~------al~a~~~~-~~~iiP~~N~~Ea~l----v~~~~~v~~~~~L~evv~~l~g~~ 76 (108)
T Consensus 698 ~~~~amTGEitL~G~VlpiGG~keK~laA~r~gi~~vi~P~~N~~d~~~ip~~v~~~l~~~~v~~~~ev~~~al~~~ 774 (784)
T PRK10787 698 RADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNE 774 (784)
T ss_pred CCCCCEEEEEEECEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHCCCEEEEECCHHHHHHHHHHCC
T ss_conf 99965556566020278207899999999984998999452123559874999886989999394999999997569