HHsearch alignment for GI: 254781027 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=99.97 E-value=4.2e-32 Score=183.07 Aligned_cols=107 Identities=28% Similarity=0.468 Sum_probs=93.2
Q ss_pred CCCCCCCCHHHHCCEEEEEEECCCCC-------HHHHHHHHHCCCE-EEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 95345888577356689985035775-------3799987203986-998365504556312881075107499999997
Q gi|254781027|r 1 MASIQAISTESFSHYLAVGEINLDGS-------LPAAICAKNMNKD-FICPQSCGSEAAWASDSLRIVAPSTLLELINHL 72 (108)
Q Consensus 1 L~Asgqi~~~~l~~~~~iGELsLdG~-------Lp~al~a~~~~~~-~iiP~~N~~Ea~lv~~~~~v~~~~~L~evv~~l 72 (108)
T Consensus 85 laaseq~da~~L~~yl~lGEL~LdG~lR~i~gvlP~~~~A~k~~~~~~iVp~~N~~EaSlv-~G~~~y~~~~L~~vv~fl 163 (505)
T TIGR00368 85 LAASEQLDAKKLDEYLFLGELALDGKLRGIKGVLPAIALAQKSGRKFIIVPKENAEEASLV-DGLNVYGADHLKEVVKFL 163 (505)
T ss_pred HHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE-CCCCEEHHHHHHHHHHHH
T ss_conf 9986333043144011001133247511045689999999865876776216675520266-387402047489999999
Q ss_pred C--CCCCCCCCCCCCC-----CCCCCCCCHHHHCCHHHHHCCC
Q ss_conf 0--9864676775444-----6765699876715846630029
Q gi|254781027|r 73 N--NKQLLPQPCKSTY-----KKRDNLPNFAEIKGQKTIKRAL 108 (108)
Q Consensus 73 ~--g~~~~~~~~~~~~-----~~~~~~~Df~dV~GQ~~aKRAL 108 (108)
T Consensus 164 ~ql~~~~L~~~t~~~~~~~~~~s~~~~~DL~dv~GQ~~akRAl 206 (505)
T TIGR00368 164 EQLGSEKLPPRTNTKAKSIINVSLIIDLDLKDVKGQQHAKRAL 206 (505)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHH
T ss_conf 7623101777545553103441320104432254510110267