HHsearch alignment of GI: 254781028 and MMDB domain: 1xhk_A_

>1xhk_A (A:) Putative protease LA homolog; LON protease, ATP dependent, catalytic DYAD, hydrolase; HET: MES; 1.90A {Methanocaldococcus jannaschii}
Probab=96.95  E-value=0.00011  Score=48.74  Aligned_cols=69  Identities=16%  Similarity=0.203  Sum_probs=53.3

Q ss_pred             EEEEEEEEEEEE----EEEEEEEEE--CCCCCCEEEEEE--------CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf             699999997330----178999998--468974379961--------625888999899999999779844211289404
Q gi|254781028|r    3 SRISTIAFQGIK----GIPVEVQVM--VSPGRVGVQIVG--------LPDKAVIESRERIQSHFIHAGLLFLVNELPSIY   68 (87)
Q Consensus         3 ski~S~al~Gi~----a~~V~VEv~--is~GlP~f~iVG--------LpD~aVkESreRVrsAl~nsGl~F~~~~~p~~~   68 (87)
                      .+++..++....    ...+++++.  .+.++|.+.++|        ++++.+++.++|+++++++.|+     .||..+
T Consensus         7 g~v~G~av~~~~~~~~~~~iev~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~   81 (187)
T 1xhk_A            7 GVIYGLAVLGAGGIGDVTKIIVQILESKNPGTHLLNISGDIAKHSITLASALSKKLVAEKKLPLPKKDI-----DLNNKE   81 (187)
T ss_dssp             TEEEEEECCSSSSCCEEEEEEEEEEECSSCEEEEESSCHHHHHHHHHHHHHHHHHHHHTTSSCCCSSCC-----CSTTEE
T ss_pred             EEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCC
T ss_conf             899889997899977539999999966789745450554355677888999999999862888784435-----546000


Q ss_pred             EEEEECHH
Q ss_conf             79963758
Q gi|254781028|r   69 LQLIYQKK   76 (87)
Q Consensus        69 ~tinl~p~   76 (87)
                      +++|+.+.
T Consensus        82 i~i~~~~~   89 (187)
T 1xhk_A           82 IYIQFSQS   89 (187)
T ss_dssp             EEEEESSC
T ss_pred             EEEECCHH
T ss_conf             46734411