HHSEARCH alignment of GI: 254781028 and SCOP domain: d1xhka_

Alignment

Probab=97.64  E-value=9.5e-05  Score=46.84  Aligned_cols=76  Identities=11%  Similarity=0.170  Sum_probs=55.9

Q ss_pred             EEEEEEEEEEEE--EEEEEEEEEECCCCC-CEEEEEECCH----HHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEEEEE
Q ss_conf             369999999733--017899999846897-4379961625----888999899999999779844211--2894047996
Q gi|254781028|r    2 ISRISTIAFQGI--KGIPVEVQVMVSPGR-VGVQIVGLPD----KAVIESRERIQSHFIHAGLLFLVN--ELPSIYLQLI   72 (87)
Q Consensus         2 lski~S~al~Gi--~a~~V~VEv~is~Gl-P~f~iVGLpD----~aVkESreRVrsAl~nsGl~F~~~--~~p~~~~tin   72 (87)
                      +++++..++.+.  .+.++.+|+++..+. |++..+|+..    .+++++++|+++++.+.++.+.-.  .|+...+++|
T Consensus         4 iG~vnGLav~~~G~~G~~~~i~v~i~~~~~~g~~~~~~~G~v~keS~~~A~~~v~~~~~~~~~~~~~~~~~~~~~di~i~   83 (185)
T d1xhka_           4 VGVIYGLAVLGAGGIGDVTKIIVQILESKNPGTHLLNISGDIAKHSITLASALSKKLVAEKKLPLPKKDIDLNNKEIYIQ   83 (185)
T ss_dssp             TTEEEEEECCSSSSCCEEEEEEEEEEECSSCEEEEESSCHHHHHHHHHHHHHHHHHHHHTTSSCCCSSCCCSTTEEEEEE
T ss_pred             EEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEE
T ss_conf             59998999988999775299999999567897555750350016788899999999998627677744355450005674


Q ss_pred             ECHHH
Q ss_conf             37588
Q gi|254781028|r   73 YQKKD   77 (87)
Q Consensus        73 l~p~d   77 (87)
                      +.|++
T Consensus        84 ~~~~~   88 (185)
T d1xhka_          84 FSQSY   88 (185)
T ss_dssp             ESSCC
T ss_pred             CCHHH
T ss_conf             54554

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: ATP-dependent protease Lon (La), catalytic domain
domain: ATP-dependent protease Lon (La), catalytic domain
species: Methanococcus jannaschii [TaxId: 2190]