HHsearch alignment for GI: 254781029 and conserved domain: PRK10361
>PRK10361 DNA recombination protein RmuC; Provisional.
Probab=95.68 E-value=0.14 Score=28.12 Aligned_cols=92 Identities=12% Similarity=0.230 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q gi|254781029|r 226 RSEIEVLENNYTKSEMRIDNITQNLKQEREAIINHGTQLCTSIAEVHESLKEELSLTSEEISVHLSRAIDSFQSIVDVRI 305 (1828)
Q Consensus 226 ~~ev~~ler~y~dnE~rir~L~~el~~ere~i~~~ae~~r~~i~~~~e~l~~el~~~s~~i~~~~~~~~e~~~~~le~r~ 305 (1828)
T Consensus 66 ~~el~~~~~~~~~lea~l~~~~~rle~~~~~~----eEk~~~l~~a~~~L~~eFenLAn~I--------------le~k~ 127 (475)
T PRK10361 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHA----DDKIRQMINSEQRLSEQFENLANRI--------------FEHSN 127 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHH
T ss_conf 99999999999989999999999899999999----9999999999999999999999999--------------99988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999
Q gi|254781029|r 306 AKVTEKTTRIVQESAQTISSKIDQLLEVLH 335 (1828)
Q Consensus 306 ~~l~~~~~~~~~~~~~~l~~~~~~l~~~L~ 335 (1828)
T Consensus 128 ~~f~eqn~e~l~~LL~Pl~E~l~~F~~~V~ 157 (475)
T PRK10361 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 888999899999998789999999999999