HHsearch alignment for GI: 254781031 and conserved domain: PRK06850

Probab=98.12  E-value=4.9e-05  Score=50.27  Aligned_cols=216  Identities=14%  Similarity=0.075  Sum_probs=98.0

Q ss_pred             EEEEEECCHHHHHHHHHHH---------HCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH
Q ss_conf             8999809656999999999---------7498399999767788777279999999999999888752035615875011
Q gi|254781031|r   11 ALLLFSGGQDSSTCLSWAL---------DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAI   81 (240)
Q Consensus        11 av~l~SGGlDS~~~l~~l~---------~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (240)
T Consensus        24 WvIGySGGKDSTavLqLvw~Al~~Lp~e~r~K~v~VIssDTlVEnPiV~~~v~~sL~~i~~~A~~~---~LPI~~~~v~P  100 (488)
T PRK06850         24 WVIGYSGGKDSTAVLQLVWNALAGLPPEKRHKPVYVISTDTLVENPVVVAWVNKSLERIKEAAKKQ---GLPITPHKLTP  100 (488)
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCEEEEECC
T ss_conf             799758771999999999999983788766898899958987567799999999999999999865---99822688148


Q ss_pred             HCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH--HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHH--HH-HH
Q ss_conf             0322444332220110001233101111111--2233377777743399365114544443455544302477--77-76
Q gi|254781031|r   82 LGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--AI-ET  156 (240)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~--~~-~~  156 (240)
T Consensus       101 --~~~dtFWvnlIGrGYPaP~~~FRWCTdRLKI~P~~rFI~~~v~~~ge~IlvLGtR~~ES~~-Ra~~m~k~e~~~~r~~  177 (488)
T PRK06850        101 --KVKDTFWVNLIGKGYPAPRRKFRWCTERLKINPSNDFIRDKVSAFGEVIVVLGTRKAESAA-RAQVMAKHKIGGTRDR  177 (488)
T ss_pred             --CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHHHCCCCCCC
T ss_conf             --8654433542047679998766547566514848999999987539789998545277799-9999998752473012


Q ss_pred             HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHC-----CCCHHHC---CCCCCCCCCCCCCCCCCCC----CCHHH
Q ss_conf             7753064321677531389889999999982820001-----4325537---2162888655556688998----68778
Q gi|254781031|r  157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV-----NLILEES---HTCYLGKRDKRYEWGYGCN----SCPAC  224 (240)
Q Consensus       157 ~~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~~~-----~~~~~~T---~SC~~~~~~~~~~~~~hCG----~C~~C  224 (240)
T Consensus       178 Ls~h~~l~n~~vy~PI~~ws~ddVW~yL~~~~nPWg~~n~~L~~lY~~A~~~gEC--Plv--~d~stpSCG~SRFGCWvC  253 (488)
T PRK06850        178 LSRHSTLPNSFVYTPIEDWSNDDVWKYLLQWENPWGGSNKDLFTLYRGATADGEC--PLV--VDTSTPSCGNSRFGCWVC  253 (488)
T ss_pred             CCCCCCCCCCEEECCHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC--CEE--ECCCCCCCCCCCCCCEEE
T ss_conf             5778888886897125537733799998618998899769999997057889967--736--579999877876661677


Q ss_pred             HHHH-----HHHHHHHH
Q ss_conf             9999-----99997306
Q gi|254781031|r  225 YLRQ-----KGWMEFKE  236 (240)
Q Consensus       225 ~~R~-----~af~~~~~  236 (240)
T Consensus       254 TvV~~DKSm~~mI~nge  270 (488)
T PRK06850        254 TVVTKDKSMEAMIQNDE  270 (488)
T ss_pred             EEECCCHHHHHHHHCCC
T ss_conf             77643372999987786