HHsearch alignment for GI: 254781031 and conserved domain: PRK10660

>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional.
Probab=99.05  E-value=1.7e-09  Score=77.89  Aligned_cols=159  Identities=13%  Similarity=0.030  Sum_probs=83.5

Q ss_pred             CHHHCCCCCEEEEEECCHHHHHHHHHHH---HC--CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             1221359948999809656999999999---74--983999997677887772799999999999998887520356158
Q gi|254781031|r    2 NDIIKKAPSALLLFSGGQDSSTCLSWAL---DR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI   76 (240)
Q Consensus         2 ~~~~~~~~~av~l~SGGlDS~~~l~~l~---~~--~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~   76 (240)
T Consensus         7 ~~~~~~~~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~HvnHgl~~~ad~~~~--fv---~~~c~---~~~ip~~~   78 (433)
T PRK10660          7 NRQLLESRQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIHIHHGLSPNADSWVK--HC---EQVCQ---QWQVPLVV   78 (433)
T ss_pred             HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHH--HH---HHHHH---HCCCCEEE
T ss_conf             664699998999972809999999999999986689828999971897926699999--99---99999---75997899


Q ss_pred             EECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             75011032244433222011000123310111111122333777777433993651145444434555443024777776
Q gi|254781031|r   77 LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET  156 (240)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  156 (240)
T Consensus        79 ~~~~v-~~-----~~~---------~~E~aAR~~RY~~f~~~~----~~--~~~l~tAHh~dDQaET-----vLlrL~RG  132 (433)
T PRK10660         79 ERVQL-AQ-----EGL---------GIEAAARQARYQAFARTL----LP--GEVLVTAQHLDDQCET-----FLLALKRG  132 (433)
T ss_pred             EEEEE-CC-----CCC---------CHHHHHHHHHHHHHHHHH----HH--CCEEEECCCCCHHHHH-----HHHHHHCC
T ss_conf             99872-79-----997---------699999999999999987----43--8879962456519999-----99998658


Q ss_pred             HHHHC-CCC-------CEEEEEEECCCCHHHHHHHHHHHCCCHHCC
Q ss_conf             77530-643-------216775313898899999999828200014
Q gi|254781031|r  157 AINLG-MES-------HVTVHTPLMWLKKYETWKLAQDIGGQDLVN  194 (240)
Q Consensus       157 ~~~~~-~~~-------~~~i~~P~~~~tK~eI~~~~~~~~~~~~~~  194 (240)
T Consensus       133 sG~~GL~gm~~~r~~~~~~liRPLL~~~r~eI~~Y~~~~~l~~~eD  178 (433)
T PRK10660        133 SGPAGLSAMAEVSPFAGTQLLRPLLARTRGELEQWAQAHGLRWIED  178 (433)
T ss_pred             CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEC
T ss_conf             9964456775224478970773744665999999999849980389