HHsearch alignment for GI: 254781031 and conserved domain: TIGR00032
>TIGR00032 argG argininosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6.3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate , . In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process.
Probab=99.16 E-value=5.2e-10 Score=81.13 Aligned_cols=161 Identities=15% Similarity=0.137 Sum_probs=94.9
Q ss_pred CEEEEEECCHHHHHHHHHHHHC-CC-EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCC
Q ss_conf 4899980965699999999974-98-399999767788777279999999999999888752035615875011032244
Q gi|254781031|r 10 SALLLFSGGQDSSTCLSWALDR-FD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISH 87 (240)
Q Consensus 10 ~av~l~SGGlDS~~~l~~l~~~-~~-~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (240)
T Consensus 1 KVvLAySGGLDTSv~l~wL~~kyG~~~Via~~~dvGQPDE~d~~~~~~kA~~~GA~~~---------~~iDak--~eFv~ 69 (420)
T TIGR00032 1 KVVLAYSGGLDTSVCLKWLEEKYGYEEVIAVTADVGQPDEEDIDAIEEKALKYGAEKH---------YTIDAK--EEFVK 69 (420)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEE---------EEEECH--HHHHH
T ss_conf 9688860702599999998865289860799975679998888889999887367102---------577236--88999
Q ss_pred C--CCCCCHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 4--332220110001--233101111111223337777774339936511454444345554430247777767753064
Q gi|254781031|r 88 S--SLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163 (240)
Q Consensus 88 ~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T Consensus 70 dy~f~aiqanA~Ye~~GG~~Y~L~TaLaRPlIA~~lVe~Ak~~Ga~AvaHGCT------GKGNDQ~RFe~~---~-~~~~ 139 (420)
T TIGR00032 70 DYLFAAIQANAVYEGTGGLVYPLSTALARPLIAKKLVEVAKKEGAEAVAHGCT------GKGNDQVRFERS---I-RALN 139 (420)
T ss_pred HHHHHHHHCCCEECCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC------CCCCCHHHHHHH---H-HHHC
T ss_conf 99888765066031787410347661145799999999984669549870768------777413576588---8-7526
Q ss_pred CCEEEEEEE--CCCC-----HHHHHHHHHHHCCCH
Q ss_conf 321677531--3898-----899999999828200
Q gi|254781031|r 164 SHVTVHTPL--MWLK-----KYETWKLAQDIGGQD 191 (240)
Q Consensus 164 ~~~~i~~P~--~~~t-----K~eI~~~~~~~~~~~ 191 (240)
T Consensus 140 p~LkviaP~R~~~~~e~lgGR~e~~eYa~~~Gip~ 174 (420)
T TIGR00032 140 PDLKVIAPWRDLNLTEELGGREEEIEYAAQKGIPV 174 (420)
T ss_pred CCCEEECCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 89858747346467764059488999999668887