HHsearch alignment for GI: 254781031 and conserved domain: pfam02540

>pfam02540 NAD_synthase NAD synthase. NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation.
Probab=98.28  E-value=9.1e-06  Score=54.79  Aligned_cols=150  Identities=15%  Similarity=0.111  Sum_probs=71.2

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHC-C-CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCC
Q ss_conf             5994899980965699999999974-9-8399999767788777279999999999999888752035615875011032
Q gi|254781031|r    7 KAPSALLLFSGGQDSSTCLSWALDR-F-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD   84 (240)
Q Consensus         7 ~~~~av~l~SGGlDS~~~l~~l~~~-~-~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (240)
T Consensus        17 g~~gvViGlSGGIDSav~a~La~~AlG~~~v~~v~mP~~~ss~~s~~~A~~la~----------~lgi~~~~i~I~~~~~   86 (243)
T pfam02540        17 GAKGVVLGLSGGIDSAVVAYLAVKALGKENVLALIMPSINSSEEDVQDALALAE----------NLGINYKTIDIKPIVR   86 (243)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH----------HHCCCEEEEECHHHHH
T ss_conf             999199978887999999999999559742899964777898889999999999----------9689269998889999


Q ss_pred             CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--CCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             2444332220110001233101111111223337777774339936511454444--34555443024777776775306
Q gi|254781031|r   85 ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGM  162 (240)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  162 (240)
T Consensus        87 ~~~~~~~~~~~-----~---~a~~Ni~aR~Rm~~ly~~A~~~~--~lVlgT~NksE~~~Gy~-------Tk--------y  141 (243)
T pfam02540        87 AFSQLFQPAKD-----D---LAKGNLKARIRMIILYAHANKFN--RLVLGTGNKSELALGYF-------TK--------Y  141 (243)
T ss_pred             HHHHHHCCCHH-----H---HHHHHHHHHHHHHHHHHHHCCCC--EEEEECCCCCCEEEEEE-------EE--------C
T ss_conf             99988532013-----7---78745578888999998623379--18981687042005432-------31--------2


Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf             43216775313898899999999828200
Q gi|254781031|r  163 ESHVTVHTPLMWLKKYETWKLAQDIGGQD  191 (240)
Q Consensus       163 ~~~~~i~~P~~~~tK~eI~~~~~~~~~~~  191 (240)
T Consensus       142 GD~~~di~Pi~dL~KteV~~la~~l~vP~  170 (243)
T pfam02540       142 GDGACDIAPIGDLYKTQVYELAKRLNVPE  170 (243)
T ss_pred             CCCCCCHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf             77765515416881899999999949888