HHsearch alignment for GI: 254781031 and conserved domain: pfam02568
>pfam02568 ThiI Thiamine biosynthesis protein (ThiI). ThiI is required for thiazole synthesis, required for thiamine biosynthesis.
Probab=99.72 E-value=2.5e-16 Score=120.26 Aligned_cols=166 Identities=19% Similarity=0.165 Sum_probs=105.0
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECHHHCCCC
Q ss_conf 99489998096569999999997498399999767788777279999999999999888752-03561587501103224
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD-SLGEDHILPLAILGDIS 86 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 86 (240)
T Consensus 3 ~gk~l~LlSGGiDSpVAa~lmmkRG~~V~~vhf~~~p~---~~~~~~~k~~~l~~~l~~y~~~~~~~l~vv~~~~~~~-- 77 (197)
T pfam02568 3 QGKVLALLSGGIDSPVAAYLMMRRGCRVVALHFINEPG---TSEEAIEKVRKLAELLAEYGTSCEGKLVVVDFTKVQK-- 77 (197)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCC---CCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH--
T ss_conf 77189886687129999999998799799999879999---9899999999999999973788754499957499999--
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r 87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (240)
T Consensus 78 ------~i----~~~~~~~~~cv~cKr~M~r~A~~iA~~~ga~~IVTGEsLGQVaSQTl~---------nl~~i~~~~~~ 138 (197)
T pfam02568 78 ------EI----IEKAPEKYRCVLCKRCMYRAAEKVAEEEGADALVTGESLGQVASQTLD---------NLRVISAATNL 138 (197)
T ss_pred ------HH----HHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC---------HHHHHHHHHCC
T ss_conf ------99----962898765456999999999999998499899847303121004531---------06999876248
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCHHCCCCH
Q ss_conf 6775313898899999999828200014325
Q gi|254781031|r 167 TVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197 (240)
Q Consensus 167 ~i~~P~~~~tK~eI~~~~~~~~~~~~~~~~~ 197 (240)
T Consensus 139 pilRPLig~DK~EIi~~Ar~IGt~~~s~~~~ 169 (197)
T pfam02568 139 PILRPLIGLDKEEIINLAKEIGTYEISIEPY 169 (197)
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCHHHHCCCC
T ss_conf 5313434699999999999948677662888