HHsearch alignment for GI: 254781031 and conserved domain: pfam06508

>pfam06508 ExsB ExsB. This family includes putative transcriptional regulators from Bacteria and Archaea.
Probab=99.91  E-value=2.6e-24  Score=169.76  Aligned_cols=133  Identities=46%  Similarity=0.801  Sum_probs=107.2

Q ss_pred             CEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCC
Q ss_conf             48999809656999999999749839999976778877727999999999999988875203561587501103224443
Q gi|254781031|r   10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSS   89 (240)
Q Consensus        10 ~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (240)
T Consensus         1 Kavvl~SGG~DSt~~l~~a~~~~~~v~ait~dYGQ~~~~Ei~~A~~ia~~l----------~i~h~vidl~~l~~~~~sa   70 (137)
T pfam06508         1 KAVVLLSGGLDSTTCLAWAKKEGYEVYALTFDYGQRHSKELECAKKIAKAL----------GVEHKIVDLDFLKQIGGSA   70 (137)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHC----------CCCCEEECCCHHHHHCCCC
T ss_conf             989991787899999999998699689998147887399999999999982----------9975030330244416552


Q ss_pred             CCCCHH----HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHH
Q ss_conf             322201----100012331011111112233377777743399365114544443455544302477
Q gi|254781031|r   90 LTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR  152 (240)
Q Consensus        90 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~  152 (240)
T Consensus        71 L~~~~~~vp~~~~~~~~~~~t~VP~RN~iflsiA~a~A~~~g~~~I~~G~~~~D~~~YPDcr~eFi~  137 (137)
T pfam06508        71 LTDDSIEVPDSELESEEIPNTYVPGRNLIFLSIAASYAEAIGANDIFIGVNEEDFSGYPDCRPEFVK  137 (137)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCC
T ss_conf             2368855566543456787765636549999999999998699979995655756889998867619