HHSEARCH alignment of GI: 254781031 and SCOP domain: d1kqpa_

Alignment
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=98.18  E-value=8.2e-06  Score=52.25  Aligned_cols=155  Identities=14%  Similarity=0.038  Sum_probs=69.0

Q ss_pred             CCCCEEEEEECCHHHHHHHHHHHHC--------C-CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             5994899980965699999999974--------9-839999976778877727999999999999988875203561587
Q gi|254781031|r    7 KAPSALLLFSGGQDSSTCLSWALDR--------F-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL   77 (240)
Q Consensus         7 ~~~~av~l~SGGlDS~~~l~~l~~~--------~-~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~   77 (240)
                      ..+++|+-+|||+||+++|+++...        | ..++++..-+...  ...+.+...++.+.         ......+
T Consensus        37 g~~gvvvglSGGIDSAv~a~L~~~A~~~~~~~~g~~~v~~v~mP~~~~--~~~~~a~~~~~~~~---------~~~~~~i  105 (271)
T d1kqpa_          37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIK---------PDKSWKF  105 (271)
T ss_dssp             TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHC---------CSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CHHHHHHHHHHHHC---------CCCCEEE
T ss_conf             998199979888889999999999999887723785223565674443--12336999998725---------5540477


Q ss_pred             ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             50110322444332220110001233101111111223337777774339936511454444345554430247777767
Q gi|254781031|r   78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA  157 (240)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (240)
                      ++...-.......    .............-.....+.....-.++...|...+.++-..+...++-..           
T Consensus       106 ~I~~~~~~~~~~~----~~~~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~~~Gy~Tk-----------  170 (271)
T d1kqpa_         106 DIKSTVSAFSDQY----QQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTK-----------  170 (271)
T ss_dssp             CCHHHHHHHHHHH----HHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHTTTCSCT-----------
T ss_pred             EEHHHHHHHHHHH----HHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHH-----------
T ss_conf             5207877678887----7765214331000121000352036776751498667886326550014666-----------


Q ss_pred             HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf             7530643216775313898899999999828200
Q gi|254781031|r  158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD  191 (240)
Q Consensus       158 ~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~  191 (240)
                          .+....-++|...++|.||.++++.++.+.
T Consensus       171 ----yGD~~~di~Pi~dL~K~eV~~La~~lgip~  200 (271)
T d1kqpa_         171 ----YGDGGADLLPLTGLTKRQGRTLLKELGAPE  200 (271)
T ss_dssp             ----TTTTCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred             ----HHHCCCHHCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             ----432110012363647787999987532011


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Bacillus subtilis [TaxId: 1423]