HHSEARCH alignment of GI: 254781031 and SCOP domain: d1xnga1

Alignment
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=98.84  E-value=5e-09  Score=72.22  Aligned_cols=150  Identities=15%  Similarity=0.024  Sum_probs=72.6

Q ss_pred             CCCEEEEEECCHHHHHHHHHHHHCC-CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCC
Q ss_conf             9948999809656999999999749-839999976778877727999999999999988875203561587501103224
Q gi|254781031|r    8 APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS   86 (240)
Q Consensus         8 ~~~av~l~SGGlDS~~~l~~l~~~~-~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (240)
                      .+++|+-+|||+||+++|.++.+.+ ..+++++...+.......+.|..+++.          ....+..+....+....
T Consensus        23 ~k~vvvglSGGVDSsv~A~L~~~a~~~~v~~v~mp~~~~~~~~~~~A~~la~~----------lgi~~~~i~~~~~~~~~   92 (255)
T d1xnga1          23 FKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEK----------FSIPYTEYSIAPYDAIF   92 (255)
T ss_dssp             CCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHH----------HTCCEEECCCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHH----------HHHCCHHHHHHHHHHHH
T ss_conf             98299978798899999999999756512111275121452558999999998----------54001235567777665


Q ss_pred             CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf             44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r   87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV  166 (240)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (240)
                      .......         ....................+...+...+.++........+               ....+...
T Consensus        93 ~~~~~~~---------~~~~~~n~~ar~r~~~l~~~a~~~~~~v~gt~n~~e~~~g~---------------~t~~gd~~  148 (255)
T d1xnga1          93 SSHFKDA---------SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGY---------------GTLFGDLA  148 (255)
T ss_dssp             HHHCTTC---------CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHHHTC---------------SCTTTTTC
T ss_pred             HHHCCCH---------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC---------------CCHHHHHC
T ss_conf             4212211---------24567888999828889988764087567873188786064---------------40043421


Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf             6775313898899999999828200
Q gi|254781031|r  167 TVHTPLMWLKKYETWKLAQDIGGQD  191 (240)
Q Consensus       167 ~i~~P~~~~tK~eI~~~~~~~~~~~  191 (240)
                      ..+.|+..++|.||.++++.+|.+.
T Consensus       149 ~~l~Pl~dL~K~eVr~LA~~lglP~  173 (255)
T d1xnga1         149 CAINPIGELFKTEVYELARRLNIPK  173 (255)
T ss_dssp             CSEETTTTSCHHHHHHHHHHTTCCH
T ss_pred             CCHHHHCCCCHHHHHHHHHHCCCCH
T ss_conf             3101312769999999999829956


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Helicobacter pylori [TaxId: 210]