Query gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 240
No_of_seqs 113 out of 2303
Neff 10.1
Searched_HMMs 13730
Date Wed Jun 1 11:18:26 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781031.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pg3a1 c.26.2.1 (A:1-230) Que 100.0 6.5E-43 0 282.3 17.3 211 9-237 2-216 (230)
2 d2c5sa1 c.26.2.6 (A:174-391) T 99.7 1E-16 7.3E-21 119.9 14.5 161 7-194 3-165 (218)
3 d1k92a1 c.26.2.1 (A:1-188) Arg 99.5 9.4E-14 6.8E-18 101.5 11.3 166 4-188 6-179 (188)
4 d1vbka1 c.26.2.6 (A:176-307) H 99.3 6.7E-12 4.9E-16 90.0 11.1 129 7-188 3-131 (132)
5 d1wy5a1 c.26.2.5 (A:1-216) Til 99.3 4.6E-12 3.3E-16 91.0 8.8 165 3-191 19-188 (216)
6 d1ni5a1 c.26.2.5 (A:0-226) tRN 99.2 2.5E-11 1.8E-15 86.4 10.0 160 3-191 8-175 (227)
7 d1vl2a1 c.26.2.1 (A:2-169) Arg 99.2 1.7E-10 1.2E-14 81.3 12.1 42 8-49 1-42 (168)
8 d1gpma1 c.26.2.1 (A:208-404) G 99.2 3E-11 2.2E-15 86.0 7.8 41 8-48 20-61 (197)
9 d1j20a1 c.26.2.1 (A:1-165) Arg 99.0 2.7E-09 2E-13 73.8 11.6 37 10-46 2-39 (165)
10 d1xnga1 c.26.2.1 (A:3-257) NH3 98.8 5E-09 3.6E-13 72.2 7.8 150 8-191 23-173 (255)
11 d1sura_ c.26.2.2 (A:) Phosphoa 98.4 2.4E-06 1.8E-10 55.5 10.3 150 8-189 44-198 (215)
12 d1zuna1 c.26.2.2 (A:1-211) Sul 98.3 5.9E-08 4.3E-12 65.5 1.3 45 2-46 20-68 (211)
13 d1wxia1 c.26.2.1 (A:2-275) NH3 98.3 2E-06 1.5E-10 56.0 8.6 37 9-45 40-87 (274)
14 d1kqpa_ c.26.2.1 (A:) NH3-depe 98.2 8.2E-06 6E-10 52.2 9.8 155 7-191 37-200 (271)
15 d1q15a1 c.26.2.1 (A:206-501) b 97.9 1.2E-05 8.9E-10 51.2 6.7 54 4-59 29-82 (296)
16 d2d13a1 c.26.2.1 (A:2-227) Hyp 97.9 0.00011 8.2E-09 45.2 10.6 137 9-190 4-140 (226)
17 d1jgta1 c.26.2.1 (A:210-508) b 97.8 1.6E-05 1.2E-09 50.5 5.8 52 7-60 31-82 (299)
18 d1ct9a1 c.26.2.1 (A:193-516) A 96.8 0.001 7.4E-08 39.3 5.0 21 11-31 37-57 (324)
19 d2dlqa2 g.37.1.1 (A:35-62) GLI 63.1 0.47 3.5E-05 22.7 -0.9 21 216-236 2-22 (28)
20 d1c0pa1 c.4.1.2 (A:999-1193,A: 45.3 7.1 0.00052 15.4 4.9 35 4-39 2-36 (268)
21 d1ffva1 a.56.1.1 (A:82-157) Ca 37.6 5.5 0.0004 16.1 1.2 13 146-158 23-35 (76)
22 d1vl1a_ c.124.1.1 (A:) 6-phosp 36.1 8.1 0.00059 15.1 1.8 40 2-42 24-67 (218)
23 d1rm6c1 a.56.1.1 (C:82-157) 4- 35.7 6.1 0.00045 15.8 1.2 13 146-158 22-34 (76)
24 d1n62a1 a.56.1.1 (A:82-163) Ca 35.1 6.4 0.00046 15.7 1.2 13 146-158 24-36 (82)
25 d1t3qa1 a.56.1.1 (A:88-168) Qu 34.3 7 0.00051 15.5 1.3 13 146-158 23-35 (81)
26 d1wyha1 g.39.1.3 (A:35-66) Fou 27.3 5.5 0.0004 16.1 -0.2 30 201-230 3-32 (32)
27 d1iiba_ c.44.2.1 (A:) Enzyme I 22.1 17 0.0013 13.0 4.6 23 8-30 1-23 (103)
28 d1ihua2 c.37.1.10 (A:308-586) 21.8 18 0.0013 13.0 3.8 42 1-42 11-58 (279)
No 1
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=100.00 E-value=6.5e-43 Score=282.34 Aligned_cols=211 Identities=42% Similarity=0.842 Sum_probs=162.5
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCC
Q ss_conf 94899980965699999999974983999997677887772799999999999998887520356158750110322444
Q gi|254781031|r 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS 88 (240)
Q Consensus 9 ~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (240)
||+|+|||||+||+++||+++++|++|++|||||||+|..+.+++....++.. ...........+......
T Consensus 2 kK~Vvl~SGGlDS~v~a~~l~~~g~~v~~v~~~ygqr~~~E~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 72 (230)
T d2pg3a1 2 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLG---------AAAHKVLDVGLLNELATS 72 (230)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHT---------CSEEEEEECTHHHHTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC---------CCCCCCCCHHHHHHCCCC
T ss_conf 86999848868899999999986996999999889754899999987677635---------440122103344312455
Q ss_pred CCCCC----HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 33222----01100012331011111112233377777743399365114544443455544302477777677530643
Q gi|254781031|r 89 SLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES 164 (240)
Q Consensus 89 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (240)
..... .............+.|.++..++..+..++...++..+.+|...++...++++++.|.+.+++++....+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~l~~~~~~a~~~~~~~i~~G~~~~d~~~~~d~~~~f~~~~~~~~~~~~~~ 152 (230)
T d2pg3a1 73 SLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIAR 152 (230)
T ss_dssp HHHHTTCCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 43344544320234412677526650068889999999887212121454333433356654076899999887751566
Q ss_pred CEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 2167753138988999999998282000143255372162888655556688998687789999999973064
Q gi|254781031|r 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237 (240)
Q Consensus 165 ~~~i~~P~~~~tK~eI~~~~~~~~~~~~~~~~~~~T~SC~~~~~~~~~~~~~hCG~C~~C~~R~~af~~~~~~ 237 (240)
++++++||+++||.||++++.+++ .+..++..|||||.|.+ ..|||+|.+|++||+||.+++..
T Consensus 153 ~~~i~~P~~~~tK~EI~~~~~~~~---~l~~~~~~T~SCy~~~~------~~~CG~C~~C~~R~~af~~~~~~ 216 (230)
T d2pg3a1 153 DIRFETPLMWLNKAETWALADYYQ---QLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQKD 216 (230)
T ss_dssp CCEEECTTTTCCHHHHHHHHHHTT---CHHHHHHHCCCCTTSCC------TTTTSCSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEEECCCHHHHHHHHHHCC---CCCCCHHCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 532686431588999999987605---65642302188889999------99798898699999999995799
No 2
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=99.72 E-value=1e-16 Score=119.92 Aligned_cols=161 Identities=17% Similarity=0.216 Sum_probs=99.5
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--EEEECHHHCC
Q ss_conf 59948999809656999999999749839999976778877727999999999999988875203561--5875011032
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED--HILPLAILGD 84 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 84 (240)
..+|+|++||||+||+++|+++.+.|++++++|||+|++...... ..+ .............. ..+......
T Consensus 3 ~~gKvvv~~SGG~DS~vla~ll~k~g~~v~av~~~~~~~~~~~~~---~~~---~~~~~~l~~~~~~~~~~~~~~~~~~- 75 (218)
T d2c5sa1 3 VGGKVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAK---QKV---IDLAQELTKYCKRVTLHLVPFTEVQ- 75 (218)
T ss_dssp TTEEEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHH---HHH---HHHHHHHGGGSSCEEEEEEECHHHH-
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHH---HHH---HHHHCCCCCCCCCCCEEEEECCHHH-
T ss_conf 788799995494899999999998499189999867986636777---777---7651000012455524786312033-
Q ss_pred CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 24443322201100012331011111112233377777743399365114544443455544302477777677530643
Q gi|254781031|r 85 ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES 164 (240)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (240)
... ................+...+..++...+++.++.|.+.+|..... +..+.......
T Consensus 76 -------~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~G~~~~d~~~~~---------~~~l~~~~~~~ 135 (218)
T d2c5sa1 76 -------KTI----NKEIPSSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQT---------LDSMHTINEVT 135 (218)
T ss_dssp -------HHH----HHHSCGGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCC---------HHHHHHHGGGC
T ss_pred -------HHH----HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHH---------HHHHHCCCHHC
T ss_conf -------332----3124542388899899999999999971254278312437524455---------78773010000
Q ss_pred CEEEEEEECCCCHHHHHHHHHHHCCCHHCC
Q ss_conf 216775313898899999999828200014
Q gi|254781031|r 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194 (240)
Q Consensus 165 ~~~i~~P~~~~tK~eI~~~~~~~~~~~~~~ 194 (240)
.+++++|++.++|.||++.+.++|.+....
T Consensus 136 ~~~iirPll~~~K~eI~~~a~~~gi~~~~~ 165 (218)
T d2c5sa1 136 NYPVIRPLITMDKLEIIKIAEEIGTYDISI 165 (218)
T ss_dssp CSCEECTTTTCCHHHHHHHHHHTTCHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
T ss_conf 026777653178999999999859966110
No 3
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=9.4e-14 Score=101.50 Aligned_cols=166 Identities=11% Similarity=0.018 Sum_probs=86.9
Q ss_pred HHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHC
Q ss_conf 21359948999809656999999999749839999976778877727999999999999988875203561587501103
Q gi|254781031|r 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG 83 (240)
Q Consensus 4 ~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (240)
-++..+|+||.||||+||+++|++|++.|+++++++++|||++....+......... .......+......
T Consensus 6 ~~~~gkKv~vA~SGGvDSsvll~lL~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 76 (188)
T d1k92a1 6 HLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEY---------GAENARLIDCRKQL 76 (188)
T ss_dssp SCCTTSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHH---------TCSEEEEEECHHHH
T ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHC---------CCCCCCCCCHHHHH
T ss_conf 389999899995797799999999998599473985105797067788899999970---------53123552054434
Q ss_pred CCCCCCC-CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 2244433-222011000123310111111122333777777433993651145444434555443024777776775306
Q gi|254781031|r 84 DISHSSL-TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162 (240)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
....... ................................+...+...+..+....... ...+.. .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~ 146 (188)
T d1k92a1 77 VAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGND-----IERFYR-----YGLLT 146 (188)
T ss_dssp HHHHHHHHHHTCCCCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSH-----HHHHHH-----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC-----CCCCHH-----HHHHH
T ss_conf 66421599999999987078356403778899999999999983833554341133234-----333105-----77751
Q ss_pred CCCEEEEEEECC-------CCHHHHHHHHHHHC
Q ss_conf 432167753138-------98899999999828
Q gi|254781031|r 163 ESHVTVHTPLMW-------LKKYETWKLAQDIG 188 (240)
Q Consensus 163 ~~~~~i~~P~~~-------~tK~eI~~~~~~~~ 188 (240)
.....+++|++. .+|.||++.+.+.|
T Consensus 147 ~~~~~ii~P~~~~~~~~~~~sk~ei~~ya~~~g 179 (188)
T d1k92a1 147 NAELQIYKPWLDTDFIDELGGRHEMSEFMIACG 179 (188)
T ss_dssp CTTCEEECGGGCHHHHHHSSSHHHHHHHHHHTT
T ss_pred CCCCCEECHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf 998874230465654413699999999999849
No 4
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.34 E-value=6.7e-12 Score=90.01 Aligned_cols=129 Identities=13% Similarity=0.044 Sum_probs=79.2
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCC
Q ss_conf 59948999809656999999999749839999976778877727999999999999988875203561587501103224
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS 86 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (240)
...|+|+|+|||+ |.+++|+++++|.+|+++||+.+++ ..+.+..++ ..+..+......
T Consensus 3 t~Gk~l~LlSGGi-SpVAa~lmmkRG~~V~~v~f~~~~~---~~ekv~~l~-------~~L~~y~~~~~~---------- 61 (132)
T d1vbka1 3 TEGRMIGILHDEL-SALAIFLMMKRGVEVIPVYIGKDDK---NLEKVRSLW-------NLLKRYSYGSKG---------- 61 (132)
T ss_dssp TTCEEEEECSSHH-HHHHHHHHHHBTCEEEEEEESCSSH---HHHHHHHHH-------HHHHTTCTTSCC----------
T ss_pred CCCEEEEEECCCC-HHHHHHHHHHCCCEEEEEEECCCHH---HHHHHHHHH-------HHHHHHCCCCCC----------
T ss_conf 6762888633784-2999999997798799999718888---999999999-------999984899872----------
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r 87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (240)
. ...... .....-+|..+++..+.+|...+......+. .. .++. ..+.
T Consensus 62 -----~------------~~v~~~-----~~~~~riA~~~~a~~ivtG~~~e~vgqvasq---t~---~~~~----~~~~ 109 (132)
T d1vbka1 62 -----F------------LVVAES-----FDRVLKLIRDFGVKGVIKGLRPNDLNSEVSE---IT---EDFK----MFPV 109 (132)
T ss_dssp -----C------------CEEESS-----HHHHHHHHHHHTCCEEECCCCGGGCCTTCHH---HH---HHHH----HCSS
T ss_pred -----E------------EEEEEH-----HHHHHHHHHHHHHHCEEEEEECCCHHHHHHH---HH---HHHH----CCCC
T ss_conf -----8------------999508-----9999999999646264888735621018899---99---9986----3066
Q ss_pred EEEEEECCCCHHHHHHHHHHHC
Q ss_conf 6775313898899999999828
Q gi|254781031|r 167 TVHTPLMWLKKYETWKLAQDIG 188 (240)
Q Consensus 167 ~i~~P~~~~tK~eI~~~~~~~~ 188 (240)
.|.+|++.++|.||++.++++|
T Consensus 110 pIlRPLi~~DK~EIi~~Ar~IG 131 (132)
T d1vbka1 110 PVYYPLIALPEEYIKSVKERLG 131 (132)
T ss_dssp CEECHHHHSCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHC
T ss_conf 2102867899999999999858
No 5
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.31 E-value=4.6e-12 Score=91.05 Aligned_cols=165 Identities=17% Similarity=0.078 Sum_probs=89.6
Q ss_pred HHHCCCCCEEEEEECCHHHHHHHHHHHHC-----CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 22135994899980965699999999974-----9839999976778877727999999999999988875203561587
Q gi|254781031|r 3 DIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77 (240)
Q Consensus 3 ~~~~~~~~av~l~SGGlDS~~~l~~l~~~-----~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
.|++..+|++|.+|||.||+++|+.|.+- ...+.++|+|+|.+..+..+ .+.+...+... ..+.+..
T Consensus 19 ~l~~~~~kv~Va~SGG~DS~~Ll~lL~~~~~~~~~~~i~~~~vdh~~r~~s~~~-----~~~~~~~~~~l---~i~~~i~ 90 (216)
T d1wy5a1 19 KIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERD-----EEFCKEFAKER---NMKIFVG 90 (216)
T ss_dssp CSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHH-----HHHHHHHHHHH---TCCEEEE
T ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH-----HHHHHHHHHHH---HHHHHHH
T ss_conf 656899869999678599999999999998766877088887511234103321-----34789999862---0001021
Q ss_pred ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 50110322444332220110001233101111111223337777774339936511454444345554430247777767
Q gi|254781031|r 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157 (240)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
....... ...............| .......+...|++.+++|.+.+|...+---.-..-.....+
T Consensus 91 ~~~~~~~-----------~~~~~~~~~~~~R~~R----y~~l~~~a~~~~~~~ia~GH~~dD~~Et~l~~l~rg~~~~~l 155 (216)
T d1wy5a1 91 KEDVRAF-----------AKENRMSLEEAGRFLR----YKFLKEILESEGFDCIATAHHLNDLLETSLLFFTRGTGLDGL 155 (216)
T ss_dssp ECCHHHH-----------HHHTTCCHHHHHHHHH----HHHHHHHHHHTTCSEEECCCCHHHHHHHHHHHHHHCCCHHHH
T ss_pred CCCHHHH-----------CCCCCCCHHHHHHHHH----HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCC
T ss_conf 0210111-----------1377644578799999----887641111223121576520241588999986148865456
Q ss_pred HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 7530643216775313898899999999828200
Q gi|254781031|r 158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 158 ~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
.. .......+++|++..+|.||.+.+.+.+.+.
T Consensus 156 ~~-~~~~~~~i~RPLl~~~k~eI~~~a~~~~l~~ 188 (216)
T d1wy5a1 156 IG-FLPKEEVIRRPLYYVKRSEIEEYAKFKGLRW 188 (216)
T ss_dssp HC-SCSEETTEECTTTTCCHHHHHHHHHHTTCCC
T ss_pred CC-CCCCCCEECCHHHCCCHHHHHHHHHHCCCCE
T ss_conf 67-7763220336230488999999999869948
No 6
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.25 E-value=2.5e-11 Score=86.44 Aligned_cols=160 Identities=12% Similarity=-0.010 Sum_probs=82.7
Q ss_pred HHHCCCCCEEEEEECCHHHHHHHHHHHH-----CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 2213599489998096569999999997-----49839999976778877727999999999999988875203561587
Q gi|254781031|r 3 DIIKKAPSALLLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77 (240)
Q Consensus 3 ~~~~~~~~av~l~SGGlDS~~~l~~l~~-----~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
..+.+.+|.+|.+|||+||+++|+.|.+ .+.++.++|+|+|-+..+..+ ++.+...+. ....+.++.
T Consensus 8 ~~l~~~kkvlva~SGG~DS~~Ll~ll~~~~~~~~~~~l~~~~vdh~~r~~s~~~-----~~~~~~~~~---~~~i~~~i~ 79 (227)
T d1ni5a1 8 RQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAW-----VTHCENVCQ---QWQVPLVVE 79 (227)
T ss_dssp HHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHH-----HHHHHHHHH---HTTCCEEEE
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH-----HHHHHHHHH---HCCCCCEEE
T ss_conf 542889968999638499999999999998758895699998678987521445-----899999975---415763266
Q ss_pred ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC---CCHHHHHHH
Q ss_conf 50110322444332220110001233101111111223337777774339936511454444345554---430247777
Q gi|254781031|r 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPD---CRHDTIRAI 154 (240)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~---~~~~~~~~~ 154 (240)
..... . ...... ......+.. .-.+...+...+..|.+.+|...+-- .+......+
T Consensus 80 ~~~~~-~-----~~~~~e---------~~~~~~~~~------~~~~~~~~~~~i~~gH~~dD~~Et~l~~l~~g~~~~~l 138 (227)
T d1ni5a1 80 RVQLA-Q-----EGLGIE---------AQARQARYQ------AFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGL 138 (227)
T ss_dssp CCCCC-C-----SSSTTT---------THHHHHHHH------HHHHTCCTTEEEECCCCHHHHHHHHHHHHTTTCCTTGG
T ss_pred ECCCC-C-----CCCCHH---------HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 31333-3-----443036---------689999999------88877520389999988886540566766326421111
Q ss_pred HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 7677530643216775313898899999999828200
Q gi|254781031|r 155 ETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 155 ~~~~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
..+........+.+++|++..+|.||.+.+...+.+.
T Consensus 139 ~~~~~~~~~~~~~iiRPLl~~~k~eI~~~~~~~~l~~ 175 (227)
T d1ni5a1 139 SAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRW 175 (227)
T ss_dssp GCCCSEEEETTEEEECGGGSCCHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf 1100101235443126664277999998750436664
No 7
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.20 E-value=1.7e-10 Score=81.31 Aligned_cols=42 Identities=26% Similarity=0.423 Sum_probs=37.9
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
Q ss_conf 994899980965699999999974983999997677887772
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~ 49 (240)
++|+|+.||||+||+++|++|++.+++++++|++++++....
T Consensus 1 K~KIvvalSGGvDS~vl~~lL~~~~~~v~a~~~~~~~~~~~~ 42 (168)
T d1vl2a1 1 KEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQKDDFV 42 (168)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCCCCHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHH
T ss_conf 988999962688899999999986996999980257773046
No 8
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
Probab=99.18 E-value=3e-11 Score=85.96 Aligned_cols=41 Identities=22% Similarity=0.124 Sum_probs=34.1
Q ss_pred CCCEEEEEECCHHHHHHHHHHHH-CCCEEEEEEEECCCCCCC
Q ss_conf 99489998096569999999997-498399999767788777
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKV 48 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~-~~~~v~~i~~~ygq~~~~ 48 (240)
.+++||.+|||+||+++|+++.+ .|..+..+.+++++....
T Consensus 20 ~~kvvV~lSGGVDSsv~a~ll~~~~g~~~~~~~~~~~~~~~~ 61 (197)
T d1gpma1 20 DDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLN 61 (197)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTT
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 996899837878799999999874086322453055335530
No 9
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.01 E-value=2.7e-09 Score=73.81 Aligned_cols=37 Identities=32% Similarity=0.538 Sum_probs=32.7
Q ss_pred CEEEEEECCHHHHHHHHHHHHC-CCEEEEEEEECCCCC
Q ss_conf 4899980965699999999974-983999997677887
Q gi|254781031|r 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRN 46 (240)
Q Consensus 10 ~av~l~SGGlDS~~~l~~l~~~-~~~v~~i~~~ygq~~ 46 (240)
|.||.+|||+||+++|++|.+. +.++++++++.+...
T Consensus 2 KvlvA~SGG~DS~vll~lL~e~~~~~vi~~~~~~~~~~ 39 (165)
T d1j20a1 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGE 39 (165)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSCSS
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCHH
T ss_conf 89999728899999999999728997999980358747
No 10
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=98.84 E-value=5e-09 Score=72.22 Aligned_cols=150 Identities=15% Similarity=0.024 Sum_probs=72.6
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCC-CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCC
Q ss_conf 9948999809656999999999749-839999976778877727999999999999988875203561587501103224
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS 86 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~~~-~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (240)
.+++|+-+|||+||+++|.++.+.+ ..+++++...+.......+.|..+++. ....+..+....+....
T Consensus 23 ~k~vvvglSGGVDSsv~A~L~~~a~~~~v~~v~mp~~~~~~~~~~~A~~la~~----------lgi~~~~i~~~~~~~~~ 92 (255)
T d1xnga1 23 FKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEK----------FSIPYTEYSIAPYDAIF 92 (255)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHH----------HTCCEEECCCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHH----------HHHCCHHHHHHHHHHHH
T ss_conf 98299978798899999999999756512111275121452558999999998----------54001235567777665
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 44332220110001233101111111223337777774339936511454444345554430247777767753064321
Q gi|254781031|r 87 HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166 (240)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (240)
....... ....................+...+...+.++........+ ....+...
T Consensus 93 ~~~~~~~---------~~~~~~n~~ar~r~~~l~~~a~~~~~~v~gt~n~~e~~~g~---------------~t~~gd~~ 148 (255)
T d1xnga1 93 SSHFKDA---------SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGY---------------GTLFGDLA 148 (255)
T ss_dssp HHHCTTC---------CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHHHTC---------------SCTTTTTC
T ss_pred HHHCCCH---------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC---------------CCHHHHHC
T ss_conf 4212211---------24567888999828889988764087567873188786064---------------40043421
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 6775313898899999999828200
Q gi|254781031|r 167 TVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 167 ~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
..+.|+..++|.||.++++.+|.+.
T Consensus 149 ~~l~Pl~dL~K~eVr~LA~~lglP~ 173 (255)
T d1xnga1 149 CAINPIGELFKTEVYELARRLNIPK 173 (255)
T ss_dssp CSEETTTTSCHHHHHHHHHHTTCCH
T ss_pred CCHHHHCCCCHHHHHHHHHHCCCCH
T ss_conf 3101312769999999999829956
No 11
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]}
Probab=98.36 E-value=2.4e-06 Score=55.54 Aligned_cols=150 Identities=12% Similarity=-0.023 Sum_probs=75.2
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCC
Q ss_conf 99489998096569999999997498399999767788777279999999999999888752035615875011032244
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISH 87 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (240)
.++.|+.+|||.||++++.++.+-+.++..+|+|.|.-++-..+....+++. . ....+++.... ..
T Consensus 44 ~~~v~vs~SgGkDS~vllhl~~~~~~~~~vvf~DTg~~fpeT~e~~~~~~~~-------~---~l~~~~~~~~~-~~--- 109 (215)
T d1sura_ 44 PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK-------L---KLNLKVYRATE-SA--- 109 (215)
T ss_dssp CSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHH-------T---TCEEEEEECSS-CH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH-------C---CCEEEEEECCC-HH---
T ss_conf 9988999448758999999998357994079987786758789999999986-------1---96046886030-47---
Q ss_pred CCCCCCHHHHHCCCCCCHHHHHH----HHHHHHHHHHHH-HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 43322201100012331011111----112233377777-7433993651145444434555443024777776775306
Q gi|254781031|r 88 SSLTKNVAMKIQDNNLPNTFVPG----RNIIFLVFAATL-AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162 (240)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
........ .......+. ...... .+... ....++.....|..+.+. ..+...+.+. .
T Consensus 110 ----~~~~~~~~--~~~~~~~~~~~~~c~~~K~-~P~~~~l~~~~~~~~i~G~Rr~Es-~~Ra~~~~~~----------~ 171 (215)
T d1sura_ 110 ----AWQEARYG--KLWEQGVEGIEKYNDINKV-EPMNRALKELNAQTWFAGLRREQS-GSRANLPVLA----------I 171 (215)
T ss_dssp ----HHHHHHHC--CGGGSHHHHHHHHHHHHTH-HHHHHHHHHTTEEEEECCCCTTSS-STTTTCCSEE----------E
T ss_pred ----HHHHHHCC--CCCCCCCCHHHHHHCCHHC-CCHHHHHHCCCCEEHHHHHHHCCH-HHHHCCCCEE----------E
T ss_conf ----99985617--8666785036664100201-631443303571106877764161-7574097640----------0
Q ss_pred CCCEEEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 432167753138988999999998282
Q gi|254781031|r 163 ESHVTVHTPLMWLKKYETWKLAQDIGG 189 (240)
Q Consensus 163 ~~~~~i~~P~~~~tK~eI~~~~~~~~~ 189 (240)
..+...++|++++|..+|+....+.+.
T Consensus 172 ~~~~~kv~Pi~~Wt~~dVw~Yi~~~~l 198 (215)
T d1sura_ 172 QRGVFKVLPIIDWDNRTIYQYLQKHGL 198 (215)
T ss_dssp ETTEEEECTTTTCCHHHHHHHHHHHTC
T ss_pred CCCEEEEECHHHCCHHHHHHHHHHCCC
T ss_conf 499999924185999999999998399
No 12
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=98.32 E-value=5.9e-08 Score=65.55 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=33.5
Q ss_pred CHHHCCCCCEEEEEECCHHHHHHHHHHHHC----CCEEEEEEEECCCCC
Q ss_conf 122135994899980965699999999974----983999997677887
Q gi|254781031|r 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRN 46 (240)
Q Consensus 2 ~~~~~~~~~av~l~SGGlDS~~~l~~l~~~----~~~v~~i~~~ygq~~ 46 (240)
++.....++.+++||||.||+++|+++.+. +..+..|+++.|..+
T Consensus 20 r~~~~~~d~i~va~SGGKDS~vlL~L~~~~~~~~~~~~~~v~~d~~~~~ 68 (211)
T d1zuna1 20 REVAAEFDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKF 68 (211)
T ss_dssp HHHHHHCSSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCC
T ss_pred HHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf 9999966997999578578899999998632333687228984575554
No 13
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]}
Probab=98.29 E-value=2e-06 Score=56.01 Aligned_cols=37 Identities=27% Similarity=0.270 Sum_probs=29.6
Q ss_pred CCEEEEEECCHHHHHHHHHHHH-----------CCCEEEEEEEECCCC
Q ss_conf 9489998096569999999997-----------498399999767788
Q gi|254781031|r 9 PSALLLFSGGQDSSTCLSWALD-----------RFDRVETLSFDYGQR 45 (240)
Q Consensus 9 ~~av~l~SGGlDS~~~l~~l~~-----------~~~~v~~i~~~ygq~ 45 (240)
+.+|+-+|||+||+++|+++.+ .+..++++...+++.
T Consensus 40 k~vVvGlSGGIDSav~A~L~~~Alg~~~v~~g~~~~~~i~v~mp~~~~ 87 (274)
T d1wxia1 40 KSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ 87 (274)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 859998978788999999999999987663055552289974688666
No 14
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=98.18 E-value=8.2e-06 Score=52.25 Aligned_cols=155 Identities=14% Similarity=0.038 Sum_probs=69.0
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHC--------C-CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 5994899980965699999999974--------9-839999976778877727999999999999988875203561587
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDR--------F-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHIL 77 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~--------~-~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
..+++|+-+|||+||+++|+++... | ..++++..-+... ...+.+...++.+. ......+
T Consensus 37 g~~gvvvglSGGIDSAv~a~L~~~A~~~~~~~~g~~~v~~v~mP~~~~--~~~~~a~~~~~~~~---------~~~~~~i 105 (271)
T d1kqpa_ 37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIK---------PDKSWKF 105 (271)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHC---------CSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CHHHHHHHHHHHHC---------CCCCEEE
T ss_conf 998199979888889999999999999887723785223565674443--12336999998725---------5540477
Q ss_pred ECHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 50110322444332220110001233101111111223337777774339936511454444345554430247777767
Q gi|254781031|r 78 PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157 (240)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
++...-....... .............-.....+.....-.++...|...+.++-..+...++-..
T Consensus 106 ~I~~~~~~~~~~~----~~~~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~~~Gy~Tk----------- 170 (271)
T d1kqpa_ 106 DIKSTVSAFSDQY----QQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTK----------- 170 (271)
T ss_dssp CCHHHHHHHHHHH----HHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHTTTCSCT-----------
T ss_pred EEHHHHHHHHHHH----HHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHH-----------
T ss_conf 5207877678887----7765214331000121000352036776751498667886326550014666-----------
Q ss_pred HHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCH
Q ss_conf 7530643216775313898899999999828200
Q gi|254781031|r 158 INLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191 (240)
Q Consensus 158 ~~~~~~~~~~i~~P~~~~tK~eI~~~~~~~~~~~ 191 (240)
.+....-++|...++|.||.++++.++.+.
T Consensus 171 ----yGD~~~di~Pi~dL~K~eV~~La~~lgip~ 200 (271)
T d1kqpa_ 171 ----YGDGGADLLPLTGLTKRQGRTLLKELGAPE 200 (271)
T ss_dssp ----TTTTCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred ----HHHCCCHHCCCCCCCHHHHHHHHHHHHHCC
T ss_conf ----432110012363647787999987532011
No 15
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}
Probab=97.93 E-value=1.2e-05 Score=51.18 Aligned_cols=54 Identities=24% Similarity=0.258 Sum_probs=37.6
Q ss_pred HHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 21359948999809656999999999749839999976778877727999999999
Q gi|254781031|r 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59 (240)
Q Consensus 4 ~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~ 59 (240)
++...+++=++||||+||+++++++.+...++.+.++.+.. ..+.+.+..+++.
T Consensus 29 ~~~~~~~VGv~LSGGlDSslia~~~~~~~~~~~tfs~~~~~--~~e~~~A~~va~~ 82 (296)
T d1q15a1 29 LAPRFDTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTEL--SNEFEFSQQVADA 82 (296)
T ss_dssp HGGGCSEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEETT--BCCHHHHHHHHHH
T ss_pred HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCC--CCHHHHHHHHHHH
T ss_conf 52589879998237088999999998617997669833688--7267899998744
No 16
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.86 E-value=0.00011 Score=45.20 Aligned_cols=137 Identities=19% Similarity=0.134 Sum_probs=67.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCC
Q ss_conf 94899980965699999999974983999997677887772799999999999998887520356158750110322444
Q gi|254781031|r 9 PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS 88 (240)
Q Consensus 9 ~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (240)
.+.++|||||.||+..+|+++++|++|..+..-....... -.-+.....+.+..... -..+...+....
T Consensus 4 ~~V~vl~SGGKDS~lAl~~a~~~G~eV~~L~t~~~~~~~s--~~~h~~~~~ll~~qAea--lgiPl~~~~~~~------- 72 (226)
T d2d13a1 4 ADVAVLYSGGKDSNYALYWALKSGLRVRYLVSMVSENEES--YMYHTPNVELTSLQARA--LGIPIIKGFTKG------- 72 (226)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECCC-----------CCTTHHHHHHH--HTCCEEEEEC---------
T ss_pred EEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCC--CCCCCCCHHHHHHHHHH--CCCCCEEEECCC-------
T ss_conf 2199992686999999999998599059999984378996--71657889999999986--389826873478-------
Q ss_pred CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 33222011000123310111111122333777777433993651145444434555443024777776775306432167
Q gi|254781031|r 89 SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168 (240)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (240)
..+ .. ...........++..+..|...... +..+.... ....+...
T Consensus 73 ----~~e---------~~---------~~~l~~~l~~~~v~~vv~Gdi~~~~------~r~r~e~~------c~~~gl~~ 118 (226)
T d2d13a1 73 ----EKE---------KE---------VEDLKNVLEGLKVDGIVAGALASRY------QKERIENV------ARELGLKV 118 (226)
T ss_dssp ----CTT---------SH---------HHHHHHHHHTBCCSEEECCCSSCHH------HHHHHHHH------HHHHTCEE
T ss_pred ----CCH---------HH---------HHHHHHHHHHCCCCCEEECCEECHH------HHHHHHHH------HHHCCCEE
T ss_conf ----612---------99---------9999999986072536761000388------89999866------87659489
Q ss_pred EEEECCCCHHHHHHHHHHHCCC
Q ss_conf 7531389889999999982820
Q gi|254781031|r 169 HTPLMWLKKYETWKLAQDIGGQ 190 (240)
Q Consensus 169 ~~P~~~~tK~eI~~~~~~~~~~ 190 (240)
..|+...+-.+.++...+.|..
T Consensus 119 ~~PLW~~d~~~ll~e~i~~G~~ 140 (226)
T d2d13a1 119 YTPAWEKDPYQYMLEIIKLGFK 140 (226)
T ss_dssp ECTTTTCCHHHHHHHHHHTTCE
T ss_pred EECCCCCCHHHHHHHHHHCCCC
T ss_conf 8235688989999999987995
No 17
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=97.82 E-value=1.6e-05 Score=50.48 Aligned_cols=52 Identities=23% Similarity=0.281 Sum_probs=35.8
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 599489998096569999999997498399999767788777279999999999
Q gi|254781031|r 7 KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60 (240)
Q Consensus 7 ~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~~~ygq~~~~~~~~a~~~~~~~ 60 (240)
......++||||+||++++.++.+.+.++.++++.+-. ..+...+..+++.+
T Consensus 31 ~~~~~gv~LSGGlDSs~iaa~~~~~~~~~~~~s~~~~~--~~e~~~A~~va~~l 82 (299)
T d1jgta1 31 PGDTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT--SNEFREARAVVDHL 82 (299)
T ss_dssp TTCCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS--CCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCC--HHHHHHHHHHHHCC
T ss_conf 79997998267799999999999837996353158640--17889999851112
No 18
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.75 E-value=0.001 Score=39.29 Aligned_cols=21 Identities=33% Similarity=0.268 Sum_probs=17.4
Q ss_pred EEEEEECCHHHHHHHHHHHHC
Q ss_conf 899980965699999999974
Q gi|254781031|r 11 ALLLFSGGQDSSTCLSWALDR 31 (240)
Q Consensus 11 av~l~SGGlDS~~~l~~l~~~ 31 (240)
.=++|||||||++++..+.+.
T Consensus 37 ig~~LSGGlDSs~Iaal~~~~ 57 (324)
T d1ct9a1 37 YGVLLSGGLDSSIISAITKKY 57 (324)
T ss_dssp EEEECCSSHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHH
T ss_conf 787715618899999999998
No 19
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.09 E-value=0.47 Score=22.72 Aligned_cols=21 Identities=29% Similarity=0.958 Sum_probs=16.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 899868778999999997306
Q gi|254781031|r 216 YGCNSCPACYLRQKGWMEFKE 236 (240)
Q Consensus 216 ~hCG~C~~C~~R~~af~~~~~ 236 (240)
..|++|..|+-|++-++|--.
T Consensus 2 f~c~kcgkcyfrkenllehea 22 (28)
T d2dlqa2 2 FECPKCGKCYFRKENLLEHEA 22 (28)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHH
T ss_conf 765635005523757888998
No 20
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Probab=45.29 E-value=7.1 Score=15.43 Aligned_cols=35 Identities=9% Similarity=0.089 Sum_probs=30.2
Q ss_pred HHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 213599489998096569999999997498399999
Q gi|254781031|r 4 IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39 (240)
Q Consensus 4 ~~~~~~~av~l~SGGlDS~~~l~~l~~~~~~v~~i~ 39 (240)
||+..+| |+..=||+==+++|+.|.++|.+|..+-
T Consensus 2 ~~~~~~k-VvVIGaGiaGl~~A~~L~~~G~~V~vie 36 (268)
T d1c0pa1 2 MMHSQKR-VVVLGSGVIGLSSALILARKGYSVHILA 36 (268)
T ss_dssp CCCCSCE-EEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCC-EEEECCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9889996-8999950999999999997899789996
No 21
>d1ffva1 a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=37.56 E-value=5.5 Score=16.11 Aligned_cols=13 Identities=8% Similarity=0.181 Sum_probs=5.0
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 4302477777677
Q gi|254781031|r 146 CRHDTIRAIETAI 158 (240)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (240)
++|.+......++
T Consensus 23 CtPG~im~~~~ll 35 (76)
T d1ffva1 23 CTPGMLMRAYRFL 35 (76)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 6039999999999
No 22
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=36.06 E-value=8.1 Score=15.07 Aligned_cols=40 Identities=13% Similarity=0.252 Sum_probs=28.3
Q ss_pred CHHHCCCCCEEEEEECCHHHHHHHHHHHHC-C---CEEEEEEEEC
Q ss_conf 122135994899980965699999999974-9---8399999767
Q gi|254781031|r 2 NDIIKKAPSALLLFSGGQDSSTCLSWALDR-F---DRVETLSFDY 42 (240)
Q Consensus 2 ~~~~~~~~~av~l~SGGlDS~~~l~~l~~~-~---~~v~~i~~~y 42 (240)
++.++.++++.+.+||| -|...+|..+.+ . .+++....|-
T Consensus 24 ~~~~~~~~~~~i~lsGG-~tp~~~y~~L~~~~~~w~kv~~~~~DE 67 (218)
T d1vl1a_ 24 EKLLEEKDKIFVVLAGG-RTPLPVYEKLAEQKFPWNRIHFFLSDE 67 (218)
T ss_dssp HHHHHHCSCEEEEECCS-TTHHHHHHHHTTSCCCGGGEEEEESEE
T ss_pred HHHHHHCCCEEEEECCC-HHHHHHHHHHHHCCCCCCEEEEEECCE
T ss_conf 99998589989997898-059999999983499800489986120
No 23
>d1rm6c1 a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=35.74 E-value=6.1 Score=15.83 Aligned_cols=13 Identities=31% Similarity=0.473 Sum_probs=5.0
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 4302477777677
Q gi|254781031|r 146 CRHDTIRAIETAI 158 (240)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (240)
++|.|......++
T Consensus 22 CtPG~im~~~~ll 34 (76)
T d1rm6c1 22 CTPGMIMASEALL 34 (76)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 7459999999999
No 24
>d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=35.12 E-value=6.4 Score=15.73 Aligned_cols=13 Identities=15% Similarity=0.294 Sum_probs=4.6
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 4302477777677
Q gi|254781031|r 146 CRHDTIRAIETAI 158 (240)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (240)
+++.+......++
T Consensus 24 CtPG~im~~~~Ll 36 (82)
T d1n62a1 24 CTPGMIMRSHRLL 36 (82)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 6518999999998
No 25
>d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]}
Probab=34.29 E-value=7 Score=15.48 Aligned_cols=13 Identities=8% Similarity=0.409 Sum_probs=4.6
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 4302477777677
Q gi|254781031|r 146 CRHDTIRAIETAI 158 (240)
Q Consensus 146 ~~~~~~~~~~~~~ 158 (240)
++|.+......++
T Consensus 23 CtPG~vm~~~~ll 35 (81)
T d1t3qa1 23 CTAGMLATARSIL 35 (81)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 7417999999998
No 26
>d1wyha1 g.39.1.3 (A:35-66) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.27 E-value=5.5 Score=16.11 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 216288865555668899868778999999
Q gi|254781031|r 201 HTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230 (240)
Q Consensus 201 ~SC~~~~~~~~~~~~~hCG~C~~C~~R~~a 230 (240)
++|-.|.-.+.=.....=-+|.+|.|-+.|
T Consensus 3 ~~C~qPIGtkSFip~~~~~yCvpCYE~kfA 32 (32)
T d1wyha1 3 SGCEQPLGSRSFVPDKGAHYCVPCYENKFA 32 (32)
T ss_dssp TTTCCBTTTSCEEEETTEEEEHHHHHHHTS
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf 544584355220317896788763010159
No 27
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=22.06 E-value=17 Score=13.01 Aligned_cols=23 Identities=22% Similarity=0.121 Sum_probs=18.0
Q ss_pred CCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 99489998096569999999997
Q gi|254781031|r 8 APSALLLFSGGQDSSTCLSWALD 30 (240)
Q Consensus 8 ~~~av~l~SGGlDS~~~l~~l~~ 30 (240)
+|+.+++.|||+=|+.++--+.+
T Consensus 1 kk~IlL~C~~G~STs~l~~km~~ 23 (103)
T d1iiba_ 1 KKHIYLFSSAGMSTSLLVSKMRA 23 (103)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 97899988998549999999999
No 28
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=21.80 E-value=18 Score=12.98 Aligned_cols=42 Identities=21% Similarity=0.166 Sum_probs=30.9
Q ss_pred CCHHHCCCCCEEEEEEC--CHHHHH----HHHHHHHCCCEEEEEEEEC
Q ss_conf 91221359948999809--656999----9999997498399999767
Q gi|254781031|r 1 MNDIIKKAPSALLLFSG--GQDSST----CLSWALDRFDRVETLSFDY 42 (240)
Q Consensus 1 ~~~~~~~~~~av~l~SG--GlDS~~----~l~~l~~~~~~v~~i~~~y 42 (240)
|-+-|.+..+.|+.+|| |+=-|+ ++..|.++|++|..|-.|-
T Consensus 11 ~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp 58 (279)
T d1ihua2 11 LVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 58 (279)
T ss_dssp HHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 998850379789999799988789999999999997899389993799
Done!