RPSBLAST alignment of GI: 254781031 and protein with PDBid: 2c5s
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Length = 413
Score = 52.0 bits (124), Expect = 1e-07
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 25/198 (12%)
Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
++L SGG DS + R VE + F ++ + +
Sbjct: 190 VMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPP----------FTSERAKQKVIDLAQE 239
Query: 71 LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
L + + T+ ++ + R ++ +A
Sbjct: 240 LTKYCKRV-----TLHLVPFTEVQKTINKEIPSSYSMTVMRRMMM-RITERIAEERNALA 293
Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
I G D++ I N + PL+ + K E K+A++IG
Sbjct: 294 ITTGESLGQ---VASQTLDSMHTINEVTNYPV------IRPLITMDKLEIIKIAEEIGTY 344
Query: 191 DLVNLILEESHTCYLGKR 208
D+ E+ T +
Sbjct: 345 DISIRPYEDCCTVFTPAS 362