HHsearch alignment of GI: 254781032 and MMDB domain: 3jyg_A_
>3jyg_A (A:) Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; 1.95A {Wolinella succinogenes}
Probab=100.00 E-value=1.8e-36 Score=215.57 Aligned_cols=116 Identities=29% Similarity=0.442 Sum_probs=103.2
Q ss_pred CEEEEEEEEECCEECCCCC--------CCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9799999997121227999--------87763567673489999999336887548862999999998887753133203
Q gi|254781032|r 1 MKITQAFTFEAAHRLPRVP--------KTHKCHRMHGHSYRVELVMEGDVDPKTGFVDDFFNIEQYFSPLLEKLDHHCLN 72 (118)
Q Consensus 1 m~itk~~~F~aaH~l~~~~--------~~~kc~~lHGH~y~v~v~~~g~~~~~~G~viDf~~lk~~~~~i~~~lDH~~Ln 72 (118)
++|+|++.|+|||||++.. ..|||+++|||||.|+|+++|+.++ .|||+||+++|+++++++++|||++||
T Consensus 5 ~~i~~~~~F~aaH~l~~~~~~~~~~~~~~gkc~~lHGHsy~v~v~l~g~~~~-~GmviDF~~lK~~~k~i~~~lDH~~L~ 83 (188)
T 3jyg_A 5 YQIAKEFDFCYGHRVWSQELNPDFSLDPCLSCRHLHGHQGKVIVHLESRELQ-RGXVTDFAHLNWFKRFIDEVLDHRFII 83 (188)
T ss_dssp EEEEEEEEEEEEECCTTCCCCHHHHSCCCCGGGSSEEEEEEEEEEEEESSCB-TTBSSCGGGGHHHHHHHHHHTTTEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEEEECC-CCCEEEHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999996774837876554235777888489727707999999978378-773660999999999886767813020
Q ss_pred CCCC------------------------------------------------CCCCCHHHHHHHHHHHHHHHCCC----C
Q ss_conf 3554------------------------------------------------33665568999999999851142----1
Q gi|254781032|r 73 EIEE------------------------------------------------LENPTAENIAIWIWKRLSTSLSI----L 100 (118)
Q Consensus 73 d~~~------------------------------------------------~~nPT~Enia~~i~~~l~~~l~~----l 100 (118)
+.++ -.+||+|+||+||+++|+++|+. +
T Consensus 84 ~~~dp~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~~~~TaE~la~~~~~~l~~~l~~~~v~~ 163 (188)
T 3jyg_A 84 DIDDPLFPTLLPHFADKSALVWXEEGYARVDFERIKGESSPILELYESFVVVRFVPTSESIASWLLELLRSRIQPLGVKV 163 (188)
T ss_dssp ETTCTTHHHHSGGGTTSCSEEECTTSEEEECGGGGTTCCHHHHHHHHHEEEESSCCCHHHHHHHHHHHHHHHCGGGTCEE
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 65771566665410222211112233321000222222222224565158842785399999999999986446687489
Q ss_pred EEEEEEECCCCEEEEEC
Q ss_conf 27999985995599750
Q gi|254781032|r 101 SSVRVYETPMSWVEYQG 117 (118)
Q Consensus 101 ~~V~v~Et~~~~a~Y~G 117 (118)
.+|+|+|||++||+|+.
T Consensus 164 ~~v~v~Et~~~~A~y~~ 180 (188)
T 3jyg_A 164 SSVEFLETPKSRARVYN 180 (188)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred EEEEEEECCCEEEEEEE
T ss_conf 99999975992899980