HHsearch alignment for GI: 254781033 and conserved domain: COG2956
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].
Probab=99.45 E-value=2.1e-09 Score=91.35 Aligned_cols=293 Identities=17% Similarity=0.056 Sum_probs=190.4
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHC
Q ss_conf 753222210001689999997268850579998654552158869999999988842126989-----999999999952
Q gi|254781033|r 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-----VTEAVVQQYVLA 201 (492)
Q Consensus 127 A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~-----a~~~L~~l~~~~ 201 (492)
T Consensus 42 GlNfLLs~Q~dKAvdlF~e~l~~d~~t~e~~ltLGnLfRsRGEvDRAIRiHQ~-L~~spdlT~~qr~lAl~qL~~Dym~a 120 (389)
T COG2956 42 GLNFLLSNQPDKAVDLFLEMLQEDPETFEAHLTLGNLFRSRGEVDRAIRIHQT-LLESPDLTFEQRLLALQQLGRDYMAA 120 (389)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 78898616963699999999835815678988988898863508899999998-85289986689999999998999985
Q ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH--HH---HHHHHHHHHCCCH
Q ss_conf 574569999999995023103578999999999999669989999999875431335279--99---9999999973994
Q gi|254781033|r 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--AS---ICAAKSLISQNKK 276 (492)
Q Consensus 202 gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~--a~---~~~a~~l~~~g~~ 276 (492)
T Consensus 121 Gl~DRAE~~f~~L~de~efa~~Alq----qLl~IYQ~treW~KAIe~A~~L~k~~~q~~~~eIAqfyCELAq~~~~~~~~ 196 (389)
T COG2956 121 GLLDRAEDIFNQLVDEGEFAEGALQ----QLLNIYQATREWEKAIDVAERLVKLGGQTYRVEIAQFYCELAQQALASSDV 196 (389)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6466899999997346343289999----999999983689999999999997188521258999999999997403118
Q ss_pred HHHHHHHHHHHHHCCCH---HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 78999999999832898---9999999850789589999999999826898-3689999999998799889999988786
Q gi|254781033|r 277 RKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAM 352 (492)
Q Consensus 277 ~~A~~~le~a~~~~p~p---~La~a~~~~~~~~~~~al~~~~~l~~~~P~~-~e~~~~LA~~~~~~g~~~~Ar~~l~~al 352 (492)
T Consensus 197 d~A~~~l~kAlqa~~~cvRAsi~lG~v~~~~g~y~~AV~~~e~v~~Qn~~yl~evl~~L~~~Y~~lg~~~~~~~fL~~~~ 276 (389)
T COG2956 197 DRARELLKKALQADKKCVRASIILGRVELAKGDYQKAVEALERVLEQNPEYLSEVLEMLYECYAQLGKPAEGLNFLRRAM 276 (389)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999998628200103545438887526669999999999984957799999999999999478778999999998
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-----------------CEECCC-------C-CCCHHHCC
Q ss_conf 6099989999999999985799899999999996288999-----------------527569-------8-95542422
Q gi|254781033|r 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP-----------------LWISDD-------G-YLSSVWLP 407 (492)
Q Consensus 353 ~~~P~~~~~~llA~ie~~e~~d~~~ar~wl~rA~~a~~dp-----------------~W~c~~-------g-~~~~~W~~ 407 (492)
T Consensus 277 ~~~~g~~~~l~l~~l~e~~eG~-~~Aq~~l~~Ql~r~Pt~~gf~rl~~~~l~daeeg~~k~sL~~lr~mvgeql~~~~~Y 355 (389)
T COG2956 277 ETNTGADAELMLADLIELQEGI-DAAQAYLTRQLRRKPTMRGFHRLMDYHLADAEEGRAKESLDLLRDMVGEQLRRKPRY 355 (389)
T ss_pred HCCCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 6447851999999999971077-999999999986298188999998855021466622325999999999997316772
Q ss_pred CCCCCCC-CCCCCCCCCCC
Q ss_conf 4837687-36400367875
Q gi|254781033|r 408 LSPISKT-LCYFEWKIPTK 425 (492)
Q Consensus 408 ~c~~~~~-~~~~~W~~p~~ 425 (492)
T Consensus 356 RC~~CGF~a~~l~W~CPsC 374 (389)
T COG2956 356 RCQNCGFTAHTLYWHCPSC 374 (389)
T ss_pred EECCCCCCHHEEEEECCCC
T ss_conf 1001686310135418875