HHsearch alignment for GI: 254781033 and conserved domain: COG4700

>COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown].
Probab=97.83  E-value=0.0036  Score=42.71  Aligned_cols=100  Identities=10%  Similarity=-0.003  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHH
Q ss_conf             999875322221000168999999726885-05799986545521588699999999888421269--899999999999
Q gi|254781033|r  123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYV  199 (492)
Q Consensus       123 ~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~-~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~--~~a~~~L~~l~~  199 (492)
T Consensus        92 r~rLa~al~elGr~~EA~~hy~qalsG~fA~d~a~lLglA~Aqfa~~~~A~a~~tLe~l~e~~pa~r~pd~~Ll~aR~la  171 (251)
T COG4700          92 RYRLANALAELGRYHEAVPHYQQALSGIFAHDAAMLLGLAQAQFAIQEFAAAQQTLEDLMEYNPAFRSPDGHLLFARTLA  171 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             99999999984105666889999854656798899988898888616588888899998605976589972589999998


Q ss_pred             HCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             52574569999999995023103
Q gi|254781033|r  200 LAKEWSRAITFLNQKKKNAKEWN  222 (492)
Q Consensus       200 ~~gdw~~A~~~l~~~~~~~~~~~  222 (492)
T Consensus       172 a~g~~a~Aesafe~a~~~ypg~~  194 (251)
T COG4700         172 AQGKYADAESAFEVAISYYPGPQ  194 (251)
T ss_pred             HCCCCHHHHHHHHHHHHHCCCHH
T ss_conf             45880558999999998588777