HHsearch alignment for GI: 254781033 and conserved domain: COG4785

>COG4785 NlpI Lipoprotein NlpI, contains TPR repeats [General function prediction only].
Probab=97.27  E-value=0.021  Score=36.71  Aligned_cols=218  Identities=15%  Similarity=0.062  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             99999999999999997210047879999863013466615899999875322221000168999999726885057999
Q gi|254781033|r   79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY  158 (492)
Q Consensus        79 rr~~k~~~al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~  158 (492)
T Consensus        60 ~~eeRA~l~fERGvlYDSlGL~~LAR~DftQaLai~P-~m~~vfNyLG~-Yl~~a~~fdaa~eaFds~~ELDp~y~Ya~l  137 (297)
T COG4785          60 TDEERAQLLFERGVLYDSLGLRALARNDFSQALAIRP-DMPEVFNYLGI-YLTQAGNFDAAYEAFDSVLELDPTYNYAHL  137 (297)
T ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHH-HHHHCCCCHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             8788889988612034224079998601456663496-75899989999-998602205799986667104775107776


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             865455215886999999998884212698999999999995257456999999-9995023103578999999999999
Q gi|254781033|r  159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENA  237 (492)
Q Consensus       159 gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~-~~~~~~~~~~~~~a~l~~~~a~~~~  237 (492)
T Consensus       138 NRgi~~YY~gR~~LAq~d~~~fYQ~D~~DPfR~LWL-Yl~E~k~dP~~A~tnL~qR~~~~d~e~WG~-~iV~~yLgkiS-  214 (297)
T COG4785         138 NRGIALYYGGRYKLAQDDLLAFYQDDPNDPFRSLWL-YLNEQKLDPKQAKTNLKQRAEKSDKEQWGW-NIVEFYLGKIS-  214 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHCCCHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHCC-
T ss_conf             044023444751555999999984498980789999-987610786899999999987056765518-79999970403-


Q ss_pred             HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             6699899999998754313352799999999999739947899999999983289899999998
Q gi|254781033|r  238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH  301 (492)
Q Consensus       238 ~~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p~La~a~~~  301 (492)
T Consensus       215 ~e~l~~~~~a~a~~n~~~Ae~LTEtyFYL~K~~l~~G~~~~A~~LfKLaiannVynfVE~RyA~  278 (297)
T COG4785         215 EETLMERLKADATDNTSLAEHLTETYFYLGKYYLSLGDLDEATALFKLAVANNVYNFVEHRYAL  278 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999986312128999999999999999986131178899999999988799999999999