HHsearch alignment for GI: 254781033 and conserved domain: KOG0550

Probab=98.78  E-value=3.4e-06  Score=66.36  Aligned_cols=276  Identities=12%  Similarity=0.034  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             99999999972100478799998630134666158999998753222210001689999997268850579998654552
Q gi|254781033|r   86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC  165 (492)
Q Consensus        86 ~al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al  165 (492)
T Consensus        51 ~~k~~gn~~yk~k~Y~nal~~yt~Ai~~~--pd~a~yy~nRAa~~m~~~~~~~a~~dar~~~r~kd~~~k~~~r~~~c~~  128 (486)
T KOG0550          51 EAKEEGNAFYKQKTYGNALKNYTFAIDMC--PDNASYYSNRAATLMMLGRFEEALGDARQSVRLKDGFSKGQLREGQCHL  128 (486)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHCHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCHHHHHH
T ss_conf             98742521777866888998889999858--4003654416889998776752421166530057874101245224455


Q ss_pred             CCCCHHHHHHHHH------------HHHHHCCCC------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             1588699999999------------888421269------8999999999995257456999999999502310357899
Q gi|254781033|r  166 RIGDLNSAQRYAT------------KALDISPDA------PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI  227 (492)
Q Consensus       166 ~~gd~~~A~~~~~------------~a~~~~P~~------~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~  227 (492)
T Consensus       129 a~~~~i~A~~~~~~~~~~~~anal~~~~~~~~s~s~~pac~~a~~lka~cl~~~~~~~~a~~ea~~ilkld~~n~~a---  205 (486)
T KOG0550         129 ALSDLIEAEEKLKSKQAYKAANALPTLEKLAPSHSREPACFKAKLLKAECLAFLGDYDEAQSEAIDILKLDATNAEA---  205 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH---
T ss_conf             56788989988621016677653122200242346773256788741056543034316778888887516301678---


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH------------HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH-
Q ss_conf             999999999966998999999987543133527999------------9999999973994789999999998328989-
Q gi|254781033|r  228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS------------ICAAKSLISQNKKRKAEVILEKIWKVNPHPE-  294 (492)
Q Consensus       228 l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~------------~~~a~~l~~~g~~~~A~~~le~a~~~~p~p~-  294 (492)
T Consensus       206 -l~vrg~~~yy~~~~~ka~~hf~qal~ldpdh~~sk~~~~~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~  284 (486)
T KOG0550         206 -LYVRGLCLYYNDNADKAINHFQQALRLDPDHQKSKSASMMPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKK  284 (486)
T ss_pred             -HHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             -8861533102320688888876520268025667767640789998875056676344246789988776337932222


Q ss_pred             -HHHHH-----HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             -99999-----98507895899999999998268983689999999998799889999988786609998999999999
Q gi|254781033|r  295 -IANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI  367 (492)
Q Consensus       295 -La~a~-----~~~~~~~~~~al~~~~~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~~llA~i  367 (492)
T Consensus       285 ~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ra~c~l~le~~e~AV~d~~~a~q~~~s~e~r~~l~~A  363 (486)
T KOG0550         285 TNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLRRANCHLALEKWEEAVEDYEKAMQLEKDCEIRRTLREA  363 (486)
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             4689998767664206771656654466663479888999998898889989999999999998630561067899999