HHsearch alignment for GI: 254781033 and conserved domain: KOG1840

>KOG1840 consensus.
Probab=98.98  E-value=3.8e-06  Score=65.98  Aligned_cols=239  Identities=17%  Similarity=0.108  Sum_probs=127.3

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC-
Q ss_conf             68850579998654552158869999999988842--------126989999999999952574569999999995023-
Q gi|254781033|r  149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-  219 (492)
Q Consensus       149 ~~~~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~--------~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~-  219 (492)
T Consensus       194 ~~P~~~~~~~~La~~y~~~g~~e~A~~l~k~Al~~l~k~~G~~hl~va~~l~~~a~~y~~~~k~~eAv~ly~~AL~i~e~  273 (508)
T KOG1840         194 EDPERLRTLRNLAEMYAVQGRLEKAEPLCKQALRILEKTSGLKHLVVASMLNILALVYRSLGKYDEAVNLYEEALTIREE  273 (508)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             78437889999999999852077899999999999987037666899999999999999744289999999999999998


Q ss_pred             ---CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC--------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             ---103578999999999999669989999999875431335--------279999999999973994789999999998
Q gi|254781033|r  220 ---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--------SIMASICAAKSLISQNKKRKAEVILEKIWK  288 (492)
Q Consensus       220 ---~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~--------~~~a~~~~a~~l~~~g~~~~A~~~le~a~~  288 (492)
T Consensus       274 ~~G~~h~~va~~l~nLa~ly~~~GKf~EA~~~~e~Al~I~~~~~~~~~~~v~~~l~~~~~~~~~~~~~Eea~~l~q~al~  353 (508)
T KOG1840         274 VFGEDHPAVAATLNNLAVLYYKQGKFAEAEEYCERALEIYEKLLGASHPEVAAQLSELAAILQSMNEYEEAKKLLQKALK  353 (508)
T ss_pred             HCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             53898789999998899998604775778999999999999850368589999998999999885205689999999999


Q ss_pred             HC------CCHHHHHHHHH-----HCCCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             32------89899999998-----50789589999999999826--------8983689999999998799889999988
Q gi|254781033|r  289 VN------PHPEIANIYTH-----LLSENTVGKLKRALRLEEIN--------KESVESLVIVSKIALEMGSIDQAHAKAM  349 (492)
Q Consensus       289 ~~------p~p~La~a~~~-----~~~~~~~~al~~~~~l~~~~--------P~~~e~~~~LA~~~~~~g~~~~Ar~~l~  349 (492)
T Consensus       354 i~~~~~g~~~~~~a~~~~nl~~l~~~~gk~~ea~~~~k~ai~~~~~~~~~~~~~~~~~l~~la~~~~~~k~~~~a~~l~~  433 (508)
T KOG1840         354 IYLDAPGEDNVNLAKIYANLAELYLKMGKYKEAEELYKKAIQILRELLGKKDYGVGKPLNQLAEAYEELKKYEEAEQLFE  433 (508)
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             99861464105789899899999999446567999999999998861567671454789999999998346022899999


Q ss_pred             HHHHC-------CCCH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf             78660-------9998-999999999998579989999999999628
Q gi|254781033|r  350 LAMKI-------APRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA  388 (492)
Q Consensus       350 ~al~~-------~P~~-~~~~llA~ie~~e~~d~~~ar~wl~rA~~a  388 (492)
T Consensus       434 ~~~~i~~~~g~~~~~~~~~~~nL~~~Y~~~g-~~e~a~~~~~~~~~~  479 (508)
T KOG1840         434 EAKDIMKLCGPDHPDVTYTYLNLAALYRAQG-NYEAAEELEEKVLNA  479 (508)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_conf             9988999858899746899988999999735-688899999999899