HHsearch alignment for GI: 254781033 and conserved domain: KOG4340

Probab=98.04  E-value=0.00077  Score=47.99  Aligned_cols=117  Identities=14%  Similarity=0.085  Sum_probs=79.9

Q ss_pred             HHHCCHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHH--HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf             972100478799998630134666158-99999875--322221000168999999726885057999865455215886
Q gi|254781033|r   94 SIAAHNIPLARKMHSYVSQQHTFHNEY-LVYLLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL  170 (492)
Q Consensus        94 al~~Gd~~~A~k~~~~a~~~~~~~~~~-L~~Ll~A~--aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~  170 (492)
T Consensus        88 LY~A~i~ADALrV~~~~~-----D~~~L~~~~lqLqaAIkYse~Dl~g~rsLveQlp~e--n~Ad~~in~gCllykegqy  160 (459)
T KOG4340          88 LYKACIYADALRVAFLLL-----DNPALHSRVLQLQAAIKYSEGDLPGSRSLVEQLPSE--NEADGQINLGCLLYKEGQY  160 (459)
T ss_pred             HHHCCCHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC--CCHHHHHCCHHHEECCCCH
T ss_conf             997035288999999956-----849899999999999860545553549999857788--8502330301200016548


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf             99999999888421269899999999999525745699999999950
Q gi|254781033|r  171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN  217 (492)
Q Consensus       171 ~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~  217 (492)
T Consensus       161 EaAvqkFqaAlqvsGyqpllAYniALaHy~~~qyasALk~iSEIieR  207 (459)
T KOG4340         161 EAAVQKFQAALQVSGYQPLLAYNLALAHYSSRQYASALKHISEIIER  207 (459)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999987305767278999999987312077899999999975