HHsearch alignment for GI: 254781033 and conserved domain: PRK04841
>PRK04841 transcriptional regulator MalT; Provisional.
Probab=98.71 E-value=6.6e-05 Score=56.28 Aligned_cols=301 Identities=11% Similarity=0.029 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHCCCCC----CCCHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH-----
Q ss_conf 999999999721004787999986301346----66158---999998753222210001689999997268850-----
Q gi|254781033|r 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHT----FHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----- 153 (492)
Q Consensus 86 ~al~~gl~al~~Gd~~~A~k~~~~a~~~~~----~~~~~---L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~----- 153 (492)
T Consensus 411 L~l~~a~~~~~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~~~e~~~lra~~a~~~~~~~~a~~~a~~al~~l~~~~~~~~ 490 (903)
T PRK04841 411 LVLLQAWLAQSQHRYSEVNTLLARAEQELKDRNIELDGTLQAEFNALRAQVAINDGDPEEAERLAKLALAELPLTWYYSR 490 (903)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 89999999997869999999999999854136765576788899999999998589999999999999753676347989
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH----H
Q ss_conf 5799986545521588699999999888421269------89999999999952574569999999995023103----5
Q gi|254781033|r 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA------PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----R 223 (492)
Q Consensus 154 ~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~------~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~----~ 223 (492)
T Consensus 491 ~~~~~~l~~~~~~~G~l~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~a~i~~~~G~l~~A~~~~~~a~~~~~~~~~~~~~ 570 (903)
T PRK04841 491 IVATSVLGEVHHCKGELARALAMMQQTEQMARQHDVYHYALWSLLQQSEILFAQGFLQAAYETQEKAFQLIEEQHLEQLP 570 (903)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999977999999999999999999838535799999999999997878999999999999999870455683
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC----CHH
Q ss_conf 7899999999999966998999999987543133-----5279999999999973994789999999998328----989
Q gi|254781033|r 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCD-----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPE 294 (492)
Q Consensus 224 ~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-----~~~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p----~p~ 294 (492)
T Consensus 571 ~~~~~~~~~a~~~~e~~~l~~A~~~~~~~l~~~~~~~~~~~l~~~~~lari~~~~g~~~~A~~~l~~~~~l~~~~~~~~~ 650 (903)
T PRK04841 571 MHEFLLRIRAQLLWEWARLDEAEQCARKGLEVLSNFQPQQQLQCLAMLARIALARGDLDNARSYLNRLENLLGNGRYHID 650 (903)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 78999999999999848789999999977999873482889999999999999869999999999999999842653244
Q ss_pred ------HHHHHHHHCCCCHHHHHHHHHHHHHHCC------CCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHC---CCC
Q ss_conf ------9999998507895899999999998268------98368--999999999879988999998878660---999
Q gi|254781033|r 295 ------IANIYTHLLSENTVGKLKRALRLEEINK------ESVES--LVIVSKIALEMGSIDQAHAKAMLAMKI---APR 357 (492)
Q Consensus 295 ------La~a~~~~~~~~~~~al~~~~~l~~~~P------~~~e~--~~~LA~~~~~~g~~~~Ar~~l~~al~~---~P~ 357 (492)
T Consensus 651 ~~~~~~~~~~~~~~~~g~~~~----a~~~l~~~~~~~~~~~~~~~~~~~~~ar~~l~~g~~~~A~~~l~~l~~~a~~~~~ 726 (903)
T PRK04841 651 WIANADKVRLIYWQMTGDKEA----IANWLRQAPKPEFANNHFLQGQWRNIARAQILLGQFDEAEIVLEELNENARSLRL 726 (903)
T ss_pred HHHHHHHHHHHHHHHCCCHHH----HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 766899999999996799999----9999872887554212677889999999999829979999999999999987275
Q ss_pred H----HHHHHHHHHHHHHCCCHHHHHHHHHHHHC-CCCC
Q ss_conf 8----99999999999857998999999999962-8899
Q gi|254781033|r 358 K----EIFLLLAQIEQANSHNTDKILYWTQSALH-AMPD 391 (492)
Q Consensus 358 ~----~~~~llA~ie~~e~~d~~~ar~wl~rA~~-a~~d 391 (492)
T Consensus 727 ~~~~~~~~ll~A~a-~~~~g~~~~A~~~l~~AL~lA~~~ 764 (903)
T PRK04841 727 MSDLNRNLILLNQL-YWQQGRKSDAQRALLEALKLANRT 764 (903)
T ss_pred HHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 34699999999999-998799999999999999976146