HHsearch alignment for GI: 254781033 and conserved domain: PRK09782
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional.
Probab=98.63 E-value=6.9e-05 Score=56.13 Aligned_cols=159 Identities=10% Similarity=-0.006 Sum_probs=75.7
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH--HHHHCCCCHHH
Q ss_conf 9999996699899999998754313352799999999999739947899999999983289899999--99850789589
Q gi|254781033|r 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSENTVG 309 (492)
Q Consensus 232 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p~La~a--~~~~~~~~~~~ 309 (492)
T Consensus 548 aa~~alaAGd~~aa~r~~~~a~~~~a~~~A~~a~i~~~~~~~g~~~~Al~~~r~al~~ap~a~~~~A~~~~~~Q~~d~~q 627 (987)
T PRK09782 548 AANTAQAAGNGAARDRWLQQAEQRGLGDNALYWWLHAQRYIPGQPELALNDLTRSLNIAPSANAYVARATIYRQRHNVPA 627 (987)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
T ss_conf 88877754897899999999875267327789999987630387387888899998608004668999999997368078
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 9999999998268983689999999998799889999988786609998-999999999998579989999999999628
Q gi|254781033|r 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 (492)
Q Consensus 310 al~~~~~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~-~~~~llA~ie~~e~~d~~~ar~wl~rA~~a 388 (492)
T Consensus 628 a~~~LAeAv~lepd~~~y~A~lGy~la~~~D~Aq~~~~lerAh~~~p~d~~~~~~lAy~~~r-l~D~a~a~~~~r~vID~ 706 (987)
T PRK09782 628 AVSDLRAALELEPNNSNYQAALGYALWDSGDIAQSREMLERAHKDLPDDPALIRQLAYVNQR-LDDMAATQHYARLVIDD 706 (987)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH-HCCHHHHHHHHHHHHHH
T ss_conf 99999999817999854115677786139989999999997521577552324788899876-13469999999999865
Q ss_pred CCC
Q ss_conf 899
Q gi|254781033|r 389 MPD 391 (492)
Q Consensus 389 ~~d 391 (492)
T Consensus 707 ~~~ 709 (987)
T PRK09782 707 IDN 709 (987)
T ss_pred HHH
T ss_conf 420