HHsearch alignment for GI: 254781033 and conserved domain: PRK10049
>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=99.41 E-value=9.3e-08 Score=78.55 Aligned_cols=131 Identities=18% Similarity=0.113 Sum_probs=86.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH------H--HHHHHHHHCCCCHHHHHHHHHHHHHHCCC-----------
Q ss_conf 9999999997399478999999999832898------9--99999985078958999999999982689-----------
Q gi|254781033|r 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHP------E--IANIYTHLLSENTVGKLKRALRLEEINKE----------- 323 (492)
Q Consensus 263 ~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p------~--La~a~~~~~~~~~~~al~~~~~l~~~~P~----------- 323 (492)
T Consensus 327 ~~avadayL~~~qP~kA~~iy~~l~~~~~~~~~~~~~e~~~~LfYA~~e~e~~~eA~~l~~~~~~~~p~~~~~~g~~~~~ 406 (818)
T PRK10049 327 RRWVASAYLDRRQPEKAAPILTELFYHPETIAPDLSDEELADLFYSLLESEQYPGALQVAVHTIETTPYFVRLYGLPTSI 406 (818)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 99999999863996899999999973485457653567887789998611118999999998653289604306888898
Q ss_pred ----CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCE
Q ss_conf ----83689999999998799889999988786609998999-999999998579989999999999628899952
Q gi|254781033|r 324 ----SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 (492)
Q Consensus 324 ----~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~-~llA~ie~~e~~d~~~ar~wl~rA~~a~~dp~W 394 (492)
T Consensus 407 PNddy~~~~~l~a~~~~~~ndL~~Ae~~le~l~~~APgN~~L~~~~A~v~r~R-g~pr~Ae~~~~~a~~l~P~~~~ 481 (818)
T PRK10049 407 PNDDWLQGQSLLVQSLKASNDLPQAEKRLEELAYTAPGNQGLRIDYASVYQAR-GWPRAAENELKAAESLEPRSLN 481 (818)
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHCCCCCHH
T ss_conf 88279999999999999757849999999999863999879999999999854-9959999999998700864279