HHsearch alignment for GI: 254781033 and conserved domain: PRK10049

>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=99.41  E-value=9.3e-08  Score=78.55  Aligned_cols=131  Identities=18%  Similarity=0.113  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH------H--HHHHHHHHCCCCHHHHHHHHHHHHHHCCC-----------
Q ss_conf             9999999997399478999999999832898------9--99999985078958999999999982689-----------
Q gi|254781033|r  263 SICAAKSLISQNKKRKAEVILEKIWKVNPHP------E--IANIYTHLLSENTVGKLKRALRLEEINKE-----------  323 (492)
Q Consensus       263 ~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p------~--La~a~~~~~~~~~~~al~~~~~l~~~~P~-----------  323 (492)
T Consensus       327 ~~avadayL~~~qP~kA~~iy~~l~~~~~~~~~~~~~e~~~~LfYA~~e~e~~~eA~~l~~~~~~~~p~~~~~~g~~~~~  406 (818)
T PRK10049        327 RRWVASAYLDRRQPEKAAPILTELFYHPETIAPDLSDEELADLFYSLLESEQYPGALQVAVHTIETTPYFVRLYGLPTSI  406 (818)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             99999999863996899999999973485457653567887789998611118999999998653289604306888898


Q ss_pred             ----CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCE
Q ss_conf             ----83689999999998799889999988786609998999-999999998579989999999999628899952
Q gi|254781033|r  324 ----SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQSALHAMPDPLW  394 (492)
Q Consensus       324 ----~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~-~llA~ie~~e~~d~~~ar~wl~rA~~a~~dp~W  394 (492)
T Consensus       407 PNddy~~~~~l~a~~~~~~ndL~~Ae~~le~l~~~APgN~~L~~~~A~v~r~R-g~pr~Ae~~~~~a~~l~P~~~~  481 (818)
T PRK10049        407 PNDDWLQGQSLLVQSLKASNDLPQAEKRLEELAYTAPGNQGLRIDYASVYQAR-GWPRAAENELKAAESLEPRSLN  481 (818)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHCCCCCHH
T ss_conf             88279999999999999757849999999999863999879999999999854-9959999999998700864279