>TIGR00416 sms DNA repair protein RadA; InterPro: IPR004504 RadA/Sms is a highly conserved eubacterial protein that shares sequence similarity with both RecA strand transferase and lon protease. The RadA/Sms family are probable ATP-dependent proteases involved in both DNA repair and degradation of proteins, peptides, glycopeptides. They are classified in as non-peptidase homologues and unassigned peptidases in MEROPS peptidase family S16 (lon protease family, clan SJ). RadA/Sms is involved in recombination and recombinational repair, most likely involving the stabilisation or processing of branched DNA molecules or blocked replication forks because of its genetic redundancy with RecG and RuvABC .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0006281 DNA repair.

Probab=95.10  E-value=0.011  Score=39.10  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=26.7

Q ss_pred             CCCCEECC-CCCCCHHHCCCCCCCCCCCCCC
Q ss_conf             99952756-9895542422483768736400
Q gi|254781033|r  390 PDPLWISD-DGYLSSVWLPLSPISKTLCYFE  419 (492)
Q Consensus       390 ~dp~W~c~-~g~~~~~W~~~c~~~~~~~~~~  419 (492)
T Consensus         5 Pk~~FvC~~CG~~~p~W~G~C~~C~aw~t~~   35 (481)
T TIGR00416         5 PKSKFVCQSCGAESPKWLGKCPACHAWNTLT   35 (481)
T ss_pred             CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHH
T ss_conf             8774202235774504647388866531377