>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795).

Probab=98.27 E-value=0.00061 Score=48.78 Aligned_cols=187 Identities=9% Similarity=-0.032 Sum_probs=121.5 Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH-----H Q ss_conf 99999999999721004787999986301346-66158999998753222210001689999997268850579-----9 Q gi|254781033|r 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHT-FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-----V 157 (492) Q Consensus 84 ~~~al~~gl~al~~Gd~~~A~k~~~~a~~~~~-~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~-----~ 157 (492) T Consensus 33 ~~~lY~~a~~~~~~~~y~~A~~~fe~l~~~yp~s~~a~~A~l~~a~a~y~~~~y~~A~~~~~~Fi~~yP~~~~~~ya~y~ 112 (235) T TIGR03302 33 AEELYNEAKEALDSGDYTEAIKYFEALESRYPFSPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAYYL 112 (235) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH T ss_conf 99999999999987899999999999998689931379999999999997643999999999999988774349999999 Q ss_pred HHHHHHH------HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 9865455------2158869999999988842126989999999999952574569999999995023103578999999 Q gi|254781033|r 158 YSLYFES------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 (492) Q Consensus 158 ~gL~~~a------l~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~ 231 (492) T Consensus 113 ~a~s~~~~~~~~~rDq~~~~~A~~~f~~~i~~yP~S~ya~dA~~~i~~-----------l~~~L----------A~~e~~ 171 (235) T TIGR03302 113 RGLSNYKQIDDSDRDQTAAREAFEAFQELIRRYPNSEYAPDAKKRMDY-----------LRNRL----------AGKELY 171 (235) T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-----------HHHHH----------HHHHHH T ss_conf 879988736654458089999999999999888996579999999999-----------99999----------999999 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 9999996699899999998754313352---79999999999973994789999999998328 Q gi|254781033|r 232 RSLENADKGDMIASYHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 (492) Q Consensus 232 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~---~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p 291 (492) T Consensus 172 ia~~Y~k~~~y~aAi~r~~~vl~~Yp~t~~~~eAl~~l~eay~~lg~~~~A~~~~~~l~~n~p 234 (235) T TIGR03302 172 VARFYLKRGAYVAAINRFETVVENYPDTPATEEALARLVEAYLALGLTDLAQDAAAVLGANYP 234 (235) T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC T ss_conf 999999841709999999999986899851399999999999986998999999999975398

HHsearch alignment for GI: 254781033 and conserved domain: TIGR03302