HHsearch alignment for GI: 254781033 and conserved domain: pfam04053

>pfam04053 Coatomer_WDAD Coatomer WD associated region. This region is composed of WD40 repeats.
Probab=93.58  E-value=0.57  Score=25.59  Aligned_cols=156  Identities=12%  Similarity=-0.004  Sum_probs=88.4

Q ss_pred             HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             97210047879999863013466615899999875322221000168999999726885057999865455215886999
Q gi|254781033|r   94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA  173 (492)
Q Consensus        94 al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~~~A  173 (492)
T Consensus       265 av~r~d~~~~~~~~~~~~l~--~p~~~~~~--i~~fLe~~G~~e~AL----~~~~D~~~rF-------eLAl~lG~L~~A  329 (435)
T pfam04053       265 ALLRKDYEEVLRIIANSNLL--PPKDQGQK--IIRFLEKKGYPELAL----QFVTDPDTRF-------DLALELGNLDVA  329 (435)
T ss_pred             HHHCCCHHHHHHHHHHCCCC--CCHHHHHH--HHHHHHHCCCHHHHH----HHCCCHHHHH-------HHHHHCCCHHHH
T ss_conf             99757788999876421336--87346679--999999779788887----6608904761-------676861999999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             99999888421269899999999999525745699999999950231035789999999999996699899999998754
Q gi|254781033|r  174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL  253 (492)
Q Consensus       174 ~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~  253 (492)
T Consensus       330 ~~~A~~~-----~~~~~Wk~Lg~~AL~~g~~~lAe~~~~k~~d----~~--------~LllLy~~tG~~~~L~kl~~~a~  392 (435)
T pfam04053       330 LEIAKEL-----DDEHKWKRLGDAALSQGNIKLAEEAYQKAKD----FD--------KLLLLYLSTGNKEKLKKLAKIAE  392 (435)
T ss_pred             HHHHHHH-----CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC----HH--------HHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             9999873-----6799999999999974995899999997425----34--------55999998499999999999999


Q ss_pred             HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             313352799999999999739947899999999
Q gi|254781033|r  254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI  286 (492)
Q Consensus       254 ~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a  286 (492)
T Consensus       393 ~~g~~n~--aF~~---~~~lgd~~~cv~lL~~t  420 (435)
T pfam04053       393 ERGDYNS--AFQN---ALYLGDVEKCVDILIKT  420 (435)
T ss_pred             HCCCCCH--HHHH---HHHHCCHHHHHHHHHHC
T ss_conf             8476229--9999---98808999999999985