HHsearch alignment for GI: 254781033 and conserved domain: pfam04053
>pfam04053 Coatomer_WDAD Coatomer WD associated region. This region is composed of WD40 repeats.
Probab=93.58 E-value=0.57 Score=25.59 Aligned_cols=156 Identities=12% Similarity=-0.004 Sum_probs=88.4
Q ss_pred HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 97210047879999863013466615899999875322221000168999999726885057999865455215886999
Q gi|254781033|r 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 (492)
Q Consensus 94 al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~~~A 173 (492)
T Consensus 265 av~r~d~~~~~~~~~~~~l~--~p~~~~~~--i~~fLe~~G~~e~AL----~~~~D~~~rF-------eLAl~lG~L~~A 329 (435)
T pfam04053 265 ALLRKDYEEVLRIIANSNLL--PPKDQGQK--IIRFLEKKGYPELAL----QFVTDPDTRF-------DLALELGNLDVA 329 (435)
T ss_pred HHHCCCHHHHHHHHHHCCCC--CCHHHHHH--HHHHHHHCCCHHHHH----HHCCCHHHHH-------HHHHHCCCHHHH
T ss_conf 99757788999876421336--87346679--999999779788887----6608904761-------676861999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99999888421269899999999999525745699999999950231035789999999999996699899999998754
Q gi|254781033|r 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 (492)
Q Consensus 174 ~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~ 253 (492)
T Consensus 330 ~~~A~~~-----~~~~~Wk~Lg~~AL~~g~~~lAe~~~~k~~d----~~--------~LllLy~~tG~~~~L~kl~~~a~ 392 (435)
T pfam04053 330 LEIAKEL-----DDEHKWKRLGDAALSQGNIKLAEEAYQKAKD----FD--------KLLLLYLSTGNKEKLKKLAKIAE 392 (435)
T ss_pred HHHHHHH-----CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC----HH--------HHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 9999873-----6799999999999974995899999997425----34--------55999998499999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 313352799999999999739947899999999
Q gi|254781033|r 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 (492)
Q Consensus 254 ~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a 286 (492)
T Consensus 393 ~~g~~n~--aF~~---~~~lgd~~~cv~lL~~t 420 (435)
T pfam04053 393 ERGDYNS--AFQN---ALYLGDVEKCVDILIKT 420 (435)
T ss_pred HCCCCCH--HHHH---HHHHCCHHHHHHHHHHC
T ss_conf 8476229--9999---98808999999999985