HHsearch alignment for GI: 254781033 and conserved domain: pfam04733
>pfam04733 Coatomer_E Coatomer epsilon subunit. This family represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex.
Probab=99.15 E-value=8.1e-07 Score=71.20 Aligned_cols=262 Identities=10% Similarity=0.028 Sum_probs=158.1
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 98753222210001689999997268850579998654552158869999999988842126989999999999952574
Q gi|254781033|r 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 (492)
Q Consensus 125 l~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw 204 (492)
T Consensus 6 f~irn~Fy~G~Yq~~i~ea~~~~~s~~~~~e~~~~~~Ra~IAlg~~~~vl~ei~~~--~~p~-L~av~~lA~y~~~~~~~ 82 (290)
T pfam04733 6 FNVRNYFYLGNYQKAINESDVTSLSEEALVERDVYMYRSYLALGSYQIVISEIKES--AATP-LQAVRLLAEYLNSPSRK 82 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC--CCCH-HHHHHHHHHHHCCCCCH
T ss_conf 78999999669999999986368991357999999999999737703788862678--9831-79999999987484114
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 56999999999502310357899999999999966998999999987543133527999999999997399478999999
Q gi|254781033|r 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 (492)
Q Consensus 205 ~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le 284 (492)
T Consensus 83 ~~~~~~l~~~~~~~~~~~~--~~~~~~aati~~~~g~~e~AL~~l~~~-----~~lE~~al~VQi~L~~nR~DLA~ke~~ 155 (290)
T pfam04733 83 ESILASLKEWVADSHIGSN--STLRLLAAIIFIHEGDFDDALKHLHKG-----ENLEAMALNVQILLKMHRIDLAEQQLK 155 (290)
T ss_pred HHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHCCCHHHHHHHHHCC-----CCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 5699999999874015667--899999999999779999999998558-----966799999999997288367999999
Q ss_pred HHHHHCCCH---HHHHHHHHHCCC--CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
Q ss_conf 999832898---999999985078--958999999999982689836899999999987998899999887866099989
Q gi|254781033|r 285 KIWKVNPHP---EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 (492)
Q Consensus 285 ~a~~~~p~p---~La~a~~~~~~~--~~~~al~~~~~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~ 359 (492)
T Consensus 156 ~~q~~~eDs~l~qLa~awv~l~~Ggek~q~A~yif~EL~~~~~~t~lllng~Av~~m~~~~~~eAe~~L~eAl~~d~~d~ 235 (290)
T pfam04733 156 KMQQIDEDATLTQLANAWVKLAVGGEKIQDAYYIFQEFSEKYDSTPLLLNGQAVCCMCLGRYEEAESLLKEALDKDAKDP 235 (290)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
T ss_conf 98843510599999999999972647789899999999852289789999999999874787999999999987288988
Q ss_pred HHH-HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 999-9999999857998999999999962889995275
Q gi|254781033|r 360 IFL-LLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS 396 (492)
Q Consensus 360 ~~~-llA~ie~~e~~d~~~ar~wl~rA~~a~~dp~W~c 396 (492)
T Consensus 236 dtlaNliv~s~~~gK~~e~~~ryl~qL~~~~p~H~~v~ 273 (290)
T pfam04733 236 ETLINLVVCALHLGKPAEVSNRNLSQLKLSHPTHPLVK 273 (290)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999999999809987899999999986299985999