HHsearch alignment for GI: 254781033 and conserved domain: pfam07219
>pfam07219 HemY_N HemY protein N-terminus. This family represents the N-terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. This is a membrane protein involved in a late step of protoheme IX synthesis.
Probab=96.46 E-value=0.087 Score=31.97 Aligned_cols=128 Identities=13% Similarity=0.026 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEE-EEH---H-HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 999999999999999973489848999899766-221---8-99999999999999999999999841828899999999
Q gi|254781033|r 5 IRYFFVISLVICSFIIVSHYPEDVSITWGNRLY-RTS---P-FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 (492)
Q Consensus 5 l~~~~~i~~~~~~~~~l~~~~G~v~i~~~~~~i-e~s---~-~~~i~~~~~~~~~~~ll~~l~~~i~~~p~~~~~~~~~r 79 (492)
T Consensus 2 ~R~l~~~~~~l~~~~~~~~----~l~~~pGyV~I~~~~~~ie~Sl~~~~~~l~~~~~~l~~l~~ll~~l~~~p~~~~~~~ 77 (134)
T pfam07219 2 LRVLLFLFLVLLLGLFGGA----WLAGQPGYVVISYGGYRIETSLTFAAILLLAVLAVLFLLEWLLRLIIRLPRRVRRYF 77 (134)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 7899999999999999999----993699959999989988941999999999999999999999999973658999999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99999999999999972100478799998630134666158999998753222210001689999997268850579998
Q gi|254781033|r 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 (492)
Q Consensus 80 r~~k~~~al~~gl~al~~Gd~~~A~k~~~~a~~~~~~~~~~L~~Ll~A~aA~~~gd~~~A~~~~~~~~~~~~~~~~~~~g 159 (492)
T Consensus 78 ~~rr-~----------------------~k~~----------~al~~Gl~a~~~Gd~~~A~k~~~ka~k~~~~p~l~~Ll 124 (134)
T pfam07219 78 RRRK-R----------------------RRGR----------KALSEGLLALAEGDWALAERLARKAAELEDQPPLALLL 124 (134)
T ss_pred HHHH-H----------------------HHHH----------HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 9999-9----------------------9999----------99999999997899999999999987637993579999
Q ss_pred HHHHHHCCCC
Q ss_conf 6545521588
Q gi|254781033|r 160 LYFESCRIGD 169 (492)
Q Consensus 160 L~~~al~~gd 169 (492)
T Consensus 125 aA~aA~~~GD 134 (134)
T pfam07219 125 AARAAQAEGD 134 (134)
T ss_pred HHHHHHHCCC
T ss_conf 9999988579