HHsearch alignment for GI: 254781033 and conserved domain: pfam09295

>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.

Probab=97.89  E-value=0.00066  Score=48.52  Aligned_cols=103  Identities=12%  Similarity=0.069  Sum_probs=43.5

Q ss_pred             CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH--HCCCCHHHHHHHHHHH
Q ss_conf             98999999987543133527999999999997399478999999999832898-99999998--5078958999999999
Q gi|254781033|r  241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH--LLSENTVGKLKRALRL  317 (492)
Q Consensus       241 ~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a~~~~p~p-~La~a~~~--~~~~~~~~al~~~~~l  317 (492)
T Consensus       184 ~~~~~~~~le~L~~~~p---~v~~llakv~~~~~~E~~av~~i~~~L~~~p~d~~LL~~Qa~FLl~K~~yelAL~~A~~a  260 (395)
T pfam09295       184 RYDRALNLLEKLREEEP---EVVSLLARVLLLMDEEIDAVKLMHDALQENPMDYELLCLQAEFLLSKKKDELALECAKRA  260 (395)
T ss_pred             CHHHHHHHHHHHHHCCC---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             38989999999875184---499999999996560899999999998618876789999999998179889999999998


Q ss_pred             HHHCCCCHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             98268983689999999998799889999
Q gi|254781033|r  318 EEINKESVESLVIVSKIALEMGSIDQAHA  346 (492)
Q Consensus       318 ~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~  346 (492)
T Consensus       261 v~~~P~~F~~W~~La~~Yi~l~d~e~ALl  289 (395)
T pfam09295       261 VNSAPSEFKTWALLVKVYIKLEDWENALL  289 (395)
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             73178661889999999998632999999