HHsearch alignment for GI: 254781033 and conserved domain: pfam09295
>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.
Probab=97.79 E-value=0.0023 Score=44.23 Aligned_cols=121 Identities=13% Similarity=0.015 Sum_probs=86.7
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 86545521588699999999888421269899999999999525745699999999950231035789999999999996
Q gi|254781033|r 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 (492)
Q Consensus 159 gL~~~al~~gd~~~A~~~~~~a~~~~P~~~~a~~~L~~l~~~~gdw~~A~~~l~~~~~~~~~~~~~~a~l~~~~a~~~~~ 238 (492)
T Consensus 174 ~Ll~~~~~t~~~~~~~~~le~L~~~~p---~v~~llakv~~~~~~E~~av~~i~~~L~~~p~----d~~LL~~Qa~FLl~ 246 (395)
T pfam09295 174 GLLKYVRLTKRYDRALNLLEKLREEEP---EVVSLLARVLLLMDEEIDAVKLMHDALQENPM----DYELLCLQAEFLLS 246 (395)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC----CHHHHHHHHHHHHH
T ss_conf 999999424438989999999875184---49999999999656089999999999861887----67899999999981
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 699899999998754313352799999999999739947899999999
Q gi|254781033|r 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 (492)
Q Consensus 239 ~~~~~~A~~~~~~a~~~~p~~~~a~~~~a~~l~~~g~~~~A~~~le~a 286 (492)
T Consensus 247 K~~yelAL~~A~~av~~~P~~F~~W~~La~~Yi~l~d~e~ALl~LNS~ 294 (395)
T pfam09295 247 KKKDELALECAKRAVNSAPSEFKTWALLVKVYIKLEDWENALLTLNSC 294 (395)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 798899999999987317866188999999999863299999999568