HHsearch alignment for GI: 254781033 and conserved domain: pfam09613
>pfam09613 HrpB1_HrpK Bacterial type III secretion protein (HrpB1_HrpK). This family of proteins is encoded by genes found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia.
Probab=93.79 E-value=0.53 Score=25.86 Aligned_cols=61 Identities=11% Similarity=-0.056 Sum_probs=32.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 7895899999999998268983689999999998799889999988786609998999999
Q gi|254781033|r 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 (492)
Q Consensus 304 ~~~~~~al~~~~~l~~~~P~~~e~~~~LA~~~~~~g~~~~Ar~~l~~al~~~P~~~~~~ll 364 (492)
T Consensus 23 ~~~~~D~e~lL~AlRvLRP~~~e~d~~dg~l~i~rg~w~dA~r~lr~v~~~~~~~~~~kAL 83 (156)
T pfam09613 23 LADIADAEELLEALRILRPRLAELDLFDGWLYIGRGQWDDAARLLRELEGRASHLPLCKAL 83 (156)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 4887789999999998589832665878778776065899999999986267784899999