RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781036|ref|YP_003065449.1| hypothetical protein CLIBASIA_04690 [Candidatus Liberibacter asiaticus str. psy62] (65 letters) >gnl|CDD|146308 pfam03602, Cons_hypoth95, Conserved hypothetical protein 95. Length = 181 Score = 24.1 bits (53), Expect = 8.6 Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 7 GSLGVAVLSRYVKSGVF 23 G+LG+ LSR S VF Sbjct: 55 GALGLEALSRGASSVVF 71 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.325 0.139 0.442 Gapped Lambda K H 0.267 0.0700 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 819,045 Number of extensions: 32150 Number of successful extensions: 97 Number of sequences better than 10.0: 1 Number of HSP's gapped: 97 Number of HSP's successfully gapped: 3 Length of query: 65 Length of database: 6,263,737 Length adjustment: 37 Effective length of query: 28 Effective length of database: 5,464,204 Effective search space: 152997712 Effective search space used: 152997712 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 50 (23.1 bits)