HHsearch alignment for GI: 254781037 and conserved domain: COG0834
>COG0834 HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].
Probab=92.27 E-value=1 Score=25.05 Aligned_cols=153 Identities=16% Similarity=0.137 Sum_probs=89.5
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCC----CCCCCCCC---CCEEECCCCCHHHHH
Q ss_conf 99999987098369974034321110122101222365683105665243----24332456---732204753028889
Q gi|254781037|r 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLKDLAL---HSVIGTSSLRRKALL 138 (307)
Q Consensus 66 kele~aLl~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~----~~l~~lp~---~a~IGTsS~RR~aql 138 (307)
T Consensus 87 ~~~~~~l~~g~~D~~~~~~~~t~-~r~~~~~f-s~py~~~~~~~~~~~~~~~~~~~~~DL~gk~v~v~~gt~-~~~~~~~ 163 (275)
T COG0834 87 DGLIPALKAGKVDIIIAGMTITP-ERKKKVDF-SDPYYYSGQVLLVKKDSDIGIKSLEDLKGKKVGVQLGTT-DEAEEKA 163 (275)
T ss_pred HHHHHHHHCCCCCEEEECCCCCH-HHHHCCCC-CCCEEECCEEEEEECCCCCCCCCHHHHCCCEEEEECCCH-HHHHHHH
T ss_conf 77638987799888985673687-77520056-777365465899976885455898895897699966845-8888776
Q ss_pred HHHHCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHC--CCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHH
Q ss_conf 98423773103307679999986378765563014545421--6211222336866735854320789998527612455
Q gi|254781037|r 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 (307)
Q Consensus 139 ~~~~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL--~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~ 216 (307)
T Consensus 164 ~~~~~~~~~~~~~~~-~~~~~al~~Gr~Da~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~-~~ 237 (275)
T COG0834 164 KKPGPNAKIVAYDSN-AEALLALKNGRADAVVSDSAVLAGLKLLKKNPGLYVLLVFPGLS---VEYLGIALRKGD-D-PE 237 (275)
T ss_pred HHCCCCCEEEECCCH-HHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCC---CCCEEEEECCCC-H-HH
T ss_conf 404677449981888-99999998499889970688876666530155653211455665---432000124685-5-99
Q ss_pred HHHHHCCHHHH
Q ss_conf 67762397888
Q gi|254781037|r 217 LVKVINHEDTW 227 (307)
Q Consensus 217 il~~Ind~~T~ 227 (307)
T Consensus 238 l~~~~n~~l~~ 248 (275)
T COG0834 238 LLEAVNKALKE 248 (275)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999