HHsearch alignment for GI: 254781037 and conserved domain: COG1464
>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].
Probab=91.18 E-value=0.94 Score=25.22 Aligned_cols=196 Identities=16% Similarity=0.127 Sum_probs=92.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 82899707988889999999999997408998338999997327411587556748622699999999870983699740
Q gi|254781037|r 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 (307)
Q Consensus 4 ~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAVHS 83 (307)
T Consensus 29 ~~I~vg~~~~p~a~ile~~~k~~~~k~----Gi~l~i~~Ft-----DY~~--------------PN~AL~~gdiDaN~-- 83 (268)
T COG1464 29 KTIKVGATPGPHAEILEVVVKPALKKK----GLDLKIVEFT-----DYVQ--------------PNEALADGDIDANA-- 83 (268)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEEEC-----CCCC--------------HHHHHHCCCCCCHH--
T ss_conf 717996368965999999987788855----9659999814-----8766--------------55787668846001--
Q ss_pred CCCCCC---CCCC-CCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCC----CCHHHHHHHHH------C----CC
Q ss_conf 343211---1012-21012223656831056652432433245673220475----30288899842------3----77
Q gi|254781037|r 84 AKDMPT---KLLK-GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS----LRRKALLLRWR------S----DI 145 (307)
Q Consensus 84 lKDlP~---~~~~-~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS----~RR~aql~~~~------p----~l 145 (307)
T Consensus 84 FQH~pyL~~~~k~~~~~Lv~vg~~~i~Pmg~YSkk~ksl~el~~GatIaiPNDpsN~gRAL~lL~~aGLIkLk~~~~~~a 163 (268)
T COG1464 84 FQHKPYLDQFNKEHGGKLVAVGNTHIEPMGLYSKKYKSLAELKDGATIAIPNDPTNEGRALLLLQKAGLIKLKDGVNLLA 163 (268)
T ss_pred HHCHHHHHHHHHHCCCCEEEEEEEEECCCEECCHHCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf 21468899999973997898755776142501220086846799998988789873567999999879679768876558
Q ss_pred CCHHHCCCHHHHHHHHHCCCCCEEEEEHH------------HHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---C
Q ss_conf 31033076799999863787655630145------------45421621122233686673585432078999852---7
Q gi|254781037|r 146 SVIDFRGKIETRLNKLNNNKAHAILLAYA------------GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---N 210 (307)
Q Consensus 146 ~~~~iRGNv~TRl~Kl~~g~~DaiilA~A------------gl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~---~ 210 (307)
T Consensus 164 T~~DI~eNP----K~lki~EldAaqlpRaLddvD~AvIN~nyA~~AgL~p~kdai~~e~--~-~~spY~Niivvr~~d~d 236 (268)
T COG1464 164 TPKDITENP----KNLKIKELEAAQLPRALDDVDAAVINTNYALQAGLNPKKDALFEED--K-DSSPYVNIIVVREEDKD 236 (268)
T ss_pred CHHHHHHCC----CCCEEEECCHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCEECCC--C-CCCCCEEEEEECCCCCC
T ss_conf 887886194----4575687056756532035677987430797759991204214146--6-67862479997155668
Q ss_pred CCHHHHHHHHHCCHHHHHHHH
Q ss_conf 612455677623978888878
Q gi|254781037|r 211 NPKAQELVKVINHEDTWDSVN 231 (307)
Q Consensus 211 d~~i~~il~~Ind~~T~~~v~ 231 (307)
T Consensus 237 ~~~ik~lv~a~qs~evk~~i~ 257 (268)
T COG1464 237 DPAVKKLVEAYQSDEVKAFIE 257 (268)
T ss_pred CHHHHHHHHHHCCHHHHHHHH
T ss_conf 889999999974999999999