HHsearch alignment for GI: 254781037 and conserved domain: COG1464

>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].
Probab=91.18  E-value=0.94  Score=25.22  Aligned_cols=196  Identities=16%  Similarity=0.127  Sum_probs=92.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             82899707988889999999999997408998338999997327411587556748622699999999870983699740
Q gi|254781037|r    4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS   83 (307)
Q Consensus         4 ~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAVHS   83 (307)
T Consensus        29 ~~I~vg~~~~p~a~ile~~~k~~~~k~----Gi~l~i~~Ft-----DY~~--------------PN~AL~~gdiDaN~--   83 (268)
T COG1464          29 KTIKVGATPGPHAEILEVVVKPALKKK----GLDLKIVEFT-----DYVQ--------------PNEALADGDIDANA--   83 (268)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEEEC-----CCCC--------------HHHHHHCCCCCCHH--
T ss_conf             717996368965999999987788855----9659999814-----8766--------------55787668846001--


Q ss_pred             CCCCCC---CCCC-CCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCC----CCHHHHHHHHH------C----CC
Q ss_conf             343211---1012-21012223656831056652432433245673220475----30288899842------3----77
Q gi|254781037|r   84 AKDMPT---KLLK-GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS----LRRKALLLRWR------S----DI  145 (307)
Q Consensus        84 lKDlP~---~~~~-~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS----~RR~aql~~~~------p----~l  145 (307)
T Consensus        84 FQH~pyL~~~~k~~~~~Lv~vg~~~i~Pmg~YSkk~ksl~el~~GatIaiPNDpsN~gRAL~lL~~aGLIkLk~~~~~~a  163 (268)
T COG1464          84 FQHKPYLDQFNKEHGGKLVAVGNTHIEPMGLYSKKYKSLAELKDGATIAIPNDPTNEGRALLLLQKAGLIKLKDGVNLLA  163 (268)
T ss_pred             HHCHHHHHHHHHHCCCCEEEEEEEEECCCEECCHHCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf             21468899999973997898755776142501220086846799998988789873567999999879679768876558


Q ss_pred             CCHHHCCCHHHHHHHHHCCCCCEEEEEHH------------HHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---C
Q ss_conf             31033076799999863787655630145------------45421621122233686673585432078999852---7
Q gi|254781037|r  146 SVIDFRGKIETRLNKLNNNKAHAILLAYA------------GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---N  210 (307)
Q Consensus       146 ~~~~iRGNv~TRl~Kl~~g~~DaiilA~A------------gl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~---~  210 (307)
T Consensus       164 T~~DI~eNP----K~lki~EldAaqlpRaLddvD~AvIN~nyA~~AgL~p~kdai~~e~--~-~~spY~Niivvr~~d~d  236 (268)
T COG1464         164 TPKDITENP----KNLKIKELEAAQLPRALDDVDAAVINTNYALQAGLNPKKDALFEED--K-DSSPYVNIIVVREEDKD  236 (268)
T ss_pred             CHHHHHHCC----CCCEEEECCHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCEECCC--C-CCCCCEEEEEECCCCCC
T ss_conf             887886194----4575687056756532035677987430797759991204214146--6-67862479997155668


Q ss_pred             CCHHHHHHHHHCCHHHHHHHH
Q ss_conf             612455677623978888878
Q gi|254781037|r  211 NPKAQELVKVINHEDTWDSVN  231 (307)
Q Consensus       211 d~~i~~il~~Ind~~T~~~v~  231 (307)
T Consensus       237 ~~~ik~lv~a~qs~evk~~i~  257 (268)
T COG1464         237 DPAVKKLVEAYQSDEVKAFIE  257 (268)
T ss_pred             CHHHHHHHHHHCCHHHHHHHH
T ss_conf             889999999974999999999