HHsearch alignment for GI: 254781037 and conserved domain: PRK09959

>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=94.84  E-value=0.36  Score=27.90  Aligned_cols=147  Identities=10%  Similarity=0.103  Sum_probs=81.0

Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCC-CCCCCEEEEECCCCCCCEEEEECCCC-CCCCCCCCCEEECCC-CCHHHHHHHHH
Q ss_conf             9999998709836997403432111-01221012223656831056652432-433245673220475-30288899842
Q gi|254781037|r   66 EEIEKKLISGEIDCAVHSAKDMPTK-LLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALHSVIGTSS-LRRKALLLRWR  142 (307)
Q Consensus        66 kele~aLl~g~iDiAVHSlKDlP~~-~~~~l~i~a~~~R~d~rD~lv~~~~~-~l~~lp~~a~IGTsS-~RR~aql~~~~  142 (307)
T Consensus       352 ~~~~~~l~~g~~D~l~~~~---~s~~r~~~l~fT~-py~~~p-~ViV~r~~~~~~~~l~~gkrvai~~~~~~~~~l~~~y  426 (1197)
T PRK09959        352 IHAGTQLNPGGWDILPGAI---YSEDRENNVLFAE-AFITTP-YVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMY  426 (1197)
T ss_pred             HHHHHHHHCCCCHHCCCCC---CCCCCCCCCEECC-CCCCCC-EEEEEECCCCCCCCHHCCCEEEECCCCCHHHHHHHHC
T ss_conf             9999998769812203235---7854434655413-235687-5999963786301142198899917850689999868


Q ss_pred             CCCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHH
Q ss_conf             377310330767999998637876556301454542162112223368667358543207899985276124556776
Q gi|254781037|r  143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV  220 (307)
Q Consensus       143 p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~~  220 (307)
T Consensus       427 P~i~~v~v-~s~~~al~~v~~G~aDa~v~~l~~a~y~-i~~~~~~~L~-~~~~~~~~~~~lafaV~~d~peL~sILnK  501 (1197)
T PRK09959        427 PEVEWIKV-DNASAAFHKVKEGELDALVATQLNSRYM-IDHYYPNELY-HFLIPGVPNASLSFAFPRGEPELKDIINK  501 (1197)
T ss_pred             CCCEEEEE-CCHHHHHHHHHCCCCCEEEEHHHHHHHH-HHHHCCCCCE-EEECCCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf             98349980-9999999999778876674244778999-9874566504-87415877632699987998899999999